Gene : Glyma.13G302900 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  3029
Name:  ? Glyma.13G302900 Secondary Identifier:  ? PAC:30501557
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-101 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G302900 0.5kb upstream 0.5kb upstream 3567 true Chr13: 39981657-39985223 Glycine max
Glyma.13G302900 0.5kb upstream 0.5kb upstream 500 false Chr13: 39984724-39985223 Glycine max
Glyma.13G302900 0.5kb downstream 0.5kb downstream 3567 true Chr13: 39981157-39984723 Glycine max
Glyma.13G302900 0.5kb downstream 0.5kb downstream 500 false Chr13: 39981157-39981656 Glycine max
Glyma.13G302900 1.0kb upstream 1.0kb upstream 4067 true Chr13: 39981657-39985723 Glycine max
Glyma.13G302900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39984724-39985723 Glycine max
Glyma.13G302900 1.0kb downstream 1.0kb downstream 4067 true Chr13: 39980657-39984723 Glycine max
Glyma.13G302900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39980657-39981656 Glycine max
Glyma.13G302900 2.0kb upstream 2.0kb upstream 5067 true Chr13: 39981657-39986723 Glycine max
Glyma.13G302900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39984724-39986723 Glycine max
Glyma.13G302900 2.0kb downstream 2.0kb downstream 5067 true Chr13: 39979657-39984723 Glycine max
Glyma.13G302900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39979657-39981656 Glycine max
Glyma.13G302900 5.0kb upstream 5.0kb upstream 8067 true Chr13: 39981657-39989723 Glycine max
Glyma.13G302900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39984724-39989723 Glycine max
Glyma.13G302900 5.0kb downstream 5.0kb downstream 8067 true Chr13: 39976657-39984723 Glycine max
Glyma.13G302900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39976657-39981656 Glycine max
Glyma.13G302900 10.0kb upstream 10.0kb upstream 13067 true Chr13: 39981657-39994723 Glycine max
Glyma.13G302900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39984724-39994723 Glycine max
Glyma.13G302900 10.0kb downstream 10.0kb downstream 13067 true Chr13: 39971657-39984723 Glycine max
Glyma.13G302900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39971657-39981656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301279 5265 Fabidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 269.466 0.0 1704.79 High High
cufflinks 94.771 0.0 431.879 High  
cufflinks 31.7851 0.0 127.992 High  
cufflinks 72.371 0.0 313.369 High  
cufflinks 8.85732 0.0 45.6922   Low
cufflinks 9.0559 0.0 32.1462   Low
cufflinks 37.2311 0.0 147.695 High  
cufflinks 65.1027 0.0 295.301 High  
cufflinks 6.43547 0.0 19.5679   Low
cufflinks 20.353     High  
cufflinks 0.183       Low
cufflinks 8.161     High  
cufflinks 0.624        
cufflinks 0.529        
cufflinks 0.842        
cufflinks 64.402     High High
cufflinks 0.242       Low
cufflinks 12.013     High  
cufflinks 18.337     High  
cufflinks 75.969     High High
cufflinks 0.288       Low
cufflinks 66.371     High High
cufflinks 51.793     High High
cufflinks 0.204       Low
cufflinks 75.975     High High
cufflinks 0.278       Low

0 Strain