Gene : Glyma.13G305800 G. max Wm82.a2.v1
Defline:  (1 of 140) PF01657 - Salt stress response/antifungal (Stress-antifung) Genomic Order:  3058
Name:  ? Glyma.13G305800 Secondary Identifier:  ? PAC:30501561
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G305800 0.5kb upstream 0.5kb upstream 1459 true Chr13: 40228826-40230284 Glycine max
Glyma.13G305800 0.5kb upstream 0.5kb upstream 500 false Chr13: 40229785-40230284 Glycine max
Glyma.13G305800 0.5kb downstream 0.5kb downstream 1459 true Chr13: 40228326-40229784 Glycine max
Glyma.13G305800 0.5kb downstream 0.5kb downstream 500 false Chr13: 40228326-40228825 Glycine max
Glyma.13G305800 1.0kb upstream 1.0kb upstream 1959 true Chr13: 40228826-40230784 Glycine max
Glyma.13G305800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40229785-40230784 Glycine max
Glyma.13G305800 1.0kb downstream 1.0kb downstream 1959 true Chr13: 40227826-40229784 Glycine max
Glyma.13G305800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40227826-40228825 Glycine max
Glyma.13G305800 2.0kb upstream 2.0kb upstream 2959 true Chr13: 40228826-40231784 Glycine max
Glyma.13G305800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40229785-40231784 Glycine max
Glyma.13G305800 2.0kb downstream 2.0kb downstream 2959 true Chr13: 40226826-40229784 Glycine max
Glyma.13G305800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40226826-40228825 Glycine max
Glyma.13G305800 5.0kb upstream 5.0kb upstream 5959 true Chr13: 40228826-40234784 Glycine max
Glyma.13G305800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40229785-40234784 Glycine max
Glyma.13G305800 5.0kb downstream 5.0kb downstream 5959 true Chr13: 40223826-40229784 Glycine max
Glyma.13G305800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40223826-40228825 Glycine max
Glyma.13G305800 10.0kb upstream 10.0kb upstream 10959 true Chr13: 40228826-40239784 Glycine max
Glyma.13G305800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40229785-40239784 Glycine max
Glyma.13G305800 10.0kb downstream 10.0kb downstream 10959 true Chr13: 40218826-40229784 Glycine max
Glyma.13G305800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40218826-40228825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314892 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4746 0.0 35.5315    
cufflinks 0.179007 0.0 0.71329 Low Low
cufflinks 12.2938 0.0 34.9994    
cufflinks 0.0980204 0.0 0.400298 Low Low
cufflinks 6.14929 0.0 19.1871    
cufflinks 112.372 0.0 319.06 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.930362 0.0 3.4563    
cufflinks 8.25316 0.0 24.6673    
cufflinks 1.739        
cufflinks 78.301     High High
cufflinks 6.542        
cufflinks 5.091        
cufflinks 7.058     High  
cufflinks 2.739        
cufflinks 0.082     Low Low
cufflinks 6.261     High  
cufflinks 0.1     Low Low
cufflinks 0.424        
cufflinks 0.018     Low Low
cufflinks 67.597     High High
cufflinks 0.103       Low
cufflinks 0.318        
cufflinks 72.399     High High
cufflinks 0.058     Low Low
cufflinks 24.148     High  

0 Strain