Gene : Glyma.13G306200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED Genomic Order:  3062
Name:  ? Glyma.13G306200 Secondary Identifier:  ? PAC:30504535
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G306200 0.5kb upstream 0.5kb upstream 3056 true Chr13: 40245855-40248910 Glycine max
Glyma.13G306200 0.5kb upstream 0.5kb upstream 500 false Chr13: 40248411-40248910 Glycine max
Glyma.13G306200 0.5kb downstream 0.5kb downstream 3056 true Chr13: 40245355-40248410 Glycine max
Glyma.13G306200 0.5kb downstream 0.5kb downstream 500 false Chr13: 40245355-40245854 Glycine max
Glyma.13G306200 1.0kb upstream 1.0kb upstream 3556 true Chr13: 40245855-40249410 Glycine max
Glyma.13G306200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40248411-40249410 Glycine max
Glyma.13G306200 1.0kb downstream 1.0kb downstream 3556 true Chr13: 40244855-40248410 Glycine max
Glyma.13G306200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40244855-40245854 Glycine max
Glyma.13G306200 2.0kb upstream 2.0kb upstream 4556 true Chr13: 40245855-40250410 Glycine max
Glyma.13G306200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40248411-40250410 Glycine max
Glyma.13G306200 2.0kb downstream 2.0kb downstream 4556 true Chr13: 40243855-40248410 Glycine max
Glyma.13G306200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40243855-40245854 Glycine max
Glyma.13G306200 5.0kb upstream 5.0kb upstream 7556 true Chr13: 40245855-40253410 Glycine max
Glyma.13G306200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40248411-40253410 Glycine max
Glyma.13G306200 5.0kb downstream 5.0kb downstream 7556 true Chr13: 40240855-40248410 Glycine max
Glyma.13G306200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40240855-40245854 Glycine max
Glyma.13G306200 10.0kb upstream 10.0kb upstream 12556 true Chr13: 40245855-40258410 Glycine max
Glyma.13G306200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40248411-40258410 Glycine max
Glyma.13G306200 10.0kb downstream 10.0kb downstream 12556 true Chr13: 40235855-40248410 Glycine max
Glyma.13G306200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40235855-40245854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298025 5265 Fabidae View MSA
124041698 5270 Rosid View MSA
123647558 5271 Pentapetalae View MSA
122681526 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115826 0.0 0.456919 Low  
cufflinks 4.16676 0.0 12.419   High
cufflinks 0.212133 0.0 0.815689    
cufflinks 0.593923 0.0 2.17702    
cufflinks 0.0221783 0.0 0.0957642 Low Low
cufflinks 0.645493 0.0 2.35791    
cufflinks 0.022456 0.0 0.0967157 Low Low
cufflinks 0.264058 0.0 1.00662    
cufflinks 0.0385195 0.0 0.159449 Low  
cufflinks 0.887        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.9        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.392        
cufflinks 0.007     Low Low
cufflinks 0.469        
cufflinks 12.584     High High
cufflinks 0.372        
cufflinks 0.019     Low Low
cufflinks 0.386        
cufflinks 0.658        
cufflinks 0.015     Low Low
cufflinks 0.319        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain