Gene : Glyma.13G290500 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  2905
Name:  ? Glyma.13G290500 Secondary Identifier:  ? PAC:30503418
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G290500 0.5kb upstream 0.5kb upstream 5278 true Chr13: 39067310-39072587 Glycine max
Glyma.13G290500 0.5kb upstream 0.5kb upstream 500 false Chr13: 39067310-39067809 Glycine max
Glyma.13G290500 0.5kb downstream 0.5kb downstream 5278 true Chr13: 39067810-39073087 Glycine max
Glyma.13G290500 0.5kb downstream 0.5kb downstream 500 false Chr13: 39072588-39073087 Glycine max
Glyma.13G290500 1.0kb upstream 1.0kb upstream 5778 true Chr13: 39066810-39072587 Glycine max
Glyma.13G290500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39066810-39067809 Glycine max
Glyma.13G290500 1.0kb downstream 1.0kb downstream 5778 true Chr13: 39067810-39073587 Glycine max
Glyma.13G290500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39072588-39073587 Glycine max
Glyma.13G290500 2.0kb upstream 2.0kb upstream 6778 true Chr13: 39065810-39072587 Glycine max
Glyma.13G290500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39065810-39067809 Glycine max
Glyma.13G290500 2.0kb downstream 2.0kb downstream 6778 true Chr13: 39067810-39074587 Glycine max
Glyma.13G290500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39072588-39074587 Glycine max
Glyma.13G290500 5.0kb upstream 5.0kb upstream 9778 true Chr13: 39062810-39072587 Glycine max
Glyma.13G290500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39062810-39067809 Glycine max
Glyma.13G290500 5.0kb downstream 5.0kb downstream 9778 true Chr13: 39067810-39077587 Glycine max
Glyma.13G290500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39072588-39077587 Glycine max
Glyma.13G290500 10.0kb upstream 10.0kb upstream 14778 true Chr13: 39057810-39072587 Glycine max
Glyma.13G290500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39057810-39067809 Glycine max
Glyma.13G290500 10.0kb downstream 10.0kb downstream 14778 true Chr13: 39067810-39082587 Glycine max
Glyma.13G290500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39072588-39082587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305596 5265 Fabidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.66671 0.0 8.57848   High
cufflinks 1.43689 0.0 5.01206   Low
cufflinks 2.09713 0.0 7.10687    
cufflinks 1.90186 0.0 6.43931    
cufflinks 2.1994 0.0 7.19198    
cufflinks 1.77946 0.0 6.02737    
cufflinks 1.57953 0.0 5.40948   Low
cufflinks 2.11521 0.0 7.06149    
cufflinks 2.17884 0.0 7.21794    
cufflinks 0.188       Low
cufflinks 0.531        
cufflinks 0.473        
cufflinks 0.398        
cufflinks 0.445        
cufflinks 0.638       High
cufflinks 0.325        
cufflinks 0.398        
cufflinks 0.382        
cufflinks 0.344        
cufflinks 0.313        
cufflinks 0.52        
cufflinks 0.313        
cufflinks 0.333        
cufflinks 0.582       High
cufflinks 0.264       Low
cufflinks 0.59       High

0 Strain