Gene : Glyma.13G291400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  2914
Name:  ? Glyma.13G291400 Secondary Identifier:  ? PAC:30500729
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G291400 0.5kb upstream 0.5kb upstream 3141 true Chr13: 39161633-39164773 Glycine max
Glyma.13G291400 0.5kb upstream 0.5kb upstream 500 false Chr13: 39161633-39162132 Glycine max
Glyma.13G291400 0.5kb downstream 0.5kb downstream 3141 true Chr13: 39162133-39165273 Glycine max
Glyma.13G291400 0.5kb downstream 0.5kb downstream 500 false Chr13: 39164774-39165273 Glycine max
Glyma.13G291400 1.0kb upstream 1.0kb upstream 3641 true Chr13: 39161133-39164773 Glycine max
Glyma.13G291400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39161133-39162132 Glycine max
Glyma.13G291400 1.0kb downstream 1.0kb downstream 3641 true Chr13: 39162133-39165773 Glycine max
Glyma.13G291400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39164774-39165773 Glycine max
Glyma.13G291400 2.0kb upstream 2.0kb upstream 4641 true Chr13: 39160133-39164773 Glycine max
Glyma.13G291400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39160133-39162132 Glycine max
Glyma.13G291400 2.0kb downstream 2.0kb downstream 4641 true Chr13: 39162133-39166773 Glycine max
Glyma.13G291400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39164774-39166773 Glycine max
Glyma.13G291400 5.0kb upstream 5.0kb upstream 7641 true Chr13: 39157133-39164773 Glycine max
Glyma.13G291400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39157133-39162132 Glycine max
Glyma.13G291400 5.0kb downstream 5.0kb downstream 7641 true Chr13: 39162133-39169773 Glycine max
Glyma.13G291400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39164774-39169773 Glycine max
Glyma.13G291400 10.0kb upstream 10.0kb upstream 12641 true Chr13: 39152133-39164773 Glycine max
Glyma.13G291400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39152133-39162132 Glycine max
Glyma.13G291400 10.0kb downstream 10.0kb downstream 12641 true Chr13: 39162133-39174773 Glycine max
Glyma.13G291400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39164774-39174773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298441 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05446 0.0 3.77086   Low
cufflinks 2.30166 0.0 7.61494    
cufflinks 6.67087 0.0 19.009    
cufflinks 2.02897 0.0 6.80975    
cufflinks 3.38956 0.0 10.6662    
cufflinks 18.6574 0.0 49.8403   High
cufflinks 1.82764 0.0 6.23419    
cufflinks 1.7792 0.0 6.06218    
cufflinks 19.7972 0.0 52.8418 High High
cufflinks 0.752       Low
cufflinks 18.226     High High
cufflinks 3.375        
cufflinks 2.295        
cufflinks 1.584        
cufflinks 17.272     High High
cufflinks 0.792       Low
cufflinks 2.183        
cufflinks 1.593        
cufflinks 2.553        
cufflinks 1.113        
cufflinks 10.557     High High
cufflinks 0.948        
cufflinks 0.733       Low
cufflinks 23.431     High High
cufflinks 0.893        
cufflinks 5.254        

0 Strain