Gene : Glyma.13G291700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Genomic Order:  2917
Name:  ? Glyma.13G291700 Secondary Identifier:  ? PAC:30504488
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G291700 0.5kb upstream 0.5kb upstream 5030 true Chr13: 39183769-39188798 Glycine max
Glyma.13G291700 0.5kb upstream 0.5kb upstream 500 false Chr13: 39183769-39184268 Glycine max
Glyma.13G291700 0.5kb downstream 0.5kb downstream 5030 true Chr13: 39184269-39189298 Glycine max
Glyma.13G291700 0.5kb downstream 0.5kb downstream 500 false Chr13: 39188799-39189298 Glycine max
Glyma.13G291700 1.0kb upstream 1.0kb upstream 5530 true Chr13: 39183269-39188798 Glycine max
Glyma.13G291700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39183269-39184268 Glycine max
Glyma.13G291700 1.0kb downstream 1.0kb downstream 5530 true Chr13: 39184269-39189798 Glycine max
Glyma.13G291700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39188799-39189798 Glycine max
Glyma.13G291700 2.0kb upstream 2.0kb upstream 6530 true Chr13: 39182269-39188798 Glycine max
Glyma.13G291700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39182269-39184268 Glycine max
Glyma.13G291700 2.0kb downstream 2.0kb downstream 6530 true Chr13: 39184269-39190798 Glycine max
Glyma.13G291700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39188799-39190798 Glycine max
Glyma.13G291700 5.0kb upstream 5.0kb upstream 9530 true Chr13: 39179269-39188798 Glycine max
Glyma.13G291700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39179269-39184268 Glycine max
Glyma.13G291700 5.0kb downstream 5.0kb downstream 9530 true Chr13: 39184269-39193798 Glycine max
Glyma.13G291700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39188799-39193798 Glycine max
Glyma.13G291700 10.0kb upstream 10.0kb upstream 14530 true Chr13: 39174269-39188798 Glycine max
Glyma.13G291700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39174269-39184268 Glycine max
Glyma.13G291700 10.0kb downstream 10.0kb downstream 14530 true Chr13: 39184269-39198798 Glycine max
Glyma.13G291700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39188799-39198798 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299240 5265 Fabidae View MSA
124062840 5270 Rosid View MSA
123739280 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8529 0.0 55.6387    
cufflinks 3.86911 0.0 11.7513    
cufflinks 31.089 0.0 83.9602 High  
cufflinks 15.4737 0.0 41.4016    
cufflinks 36.494 0.0 99.2425 High  
cufflinks 30.3864 0.0 81.8346 High  
cufflinks 0.453002 0.0 1.69098   Low
cufflinks 11.9725 0.0 32.3334    
cufflinks 28.0656 0.0 75.3429 High  
cufflinks 5.609        
cufflinks 151.164     High High
cufflinks 10.405     High  
cufflinks 35.855     High  
cufflinks 27.253     High  
cufflinks 71.684     High High
cufflinks 3.823       Low
cufflinks 31.644     High  
cufflinks 13.05     High  
cufflinks 2.553       Low
cufflinks 5.755        
cufflinks 160.888     High High
cufflinks 5.406        
cufflinks 3.065       Low
cufflinks 79.278     High High
cufflinks 4.425        
cufflinks 69.74     High  

0 Strain