Gene : Glyma.13G296600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  2966
Name:  ? Glyma.13G296600 Secondary Identifier:  ? PAC:30502718
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G296600 0.5kb upstream 0.5kb upstream 4918 true Chr13: 39567537-39572454 Glycine max
Glyma.13G296600 0.5kb upstream 0.5kb upstream 500 false Chr13: 39567537-39568036 Glycine max
Glyma.13G296600 0.5kb downstream 0.5kb downstream 4918 true Chr13: 39568037-39572954 Glycine max
Glyma.13G296600 0.5kb downstream 0.5kb downstream 500 false Chr13: 39572455-39572954 Glycine max
Glyma.13G296600 1.0kb upstream 1.0kb upstream 5418 true Chr13: 39567037-39572454 Glycine max
Glyma.13G296600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39567037-39568036 Glycine max
Glyma.13G296600 1.0kb downstream 1.0kb downstream 5418 true Chr13: 39568037-39573454 Glycine max
Glyma.13G296600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39572455-39573454 Glycine max
Glyma.13G296600 2.0kb upstream 2.0kb upstream 6418 true Chr13: 39566037-39572454 Glycine max
Glyma.13G296600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39566037-39568036 Glycine max
Glyma.13G296600 2.0kb downstream 2.0kb downstream 6418 true Chr13: 39568037-39574454 Glycine max
Glyma.13G296600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39572455-39574454 Glycine max
Glyma.13G296600 5.0kb upstream 5.0kb upstream 9418 true Chr13: 39563037-39572454 Glycine max
Glyma.13G296600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39563037-39568036 Glycine max
Glyma.13G296600 5.0kb downstream 5.0kb downstream 9418 true Chr13: 39568037-39577454 Glycine max
Glyma.13G296600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39572455-39577454 Glycine max
Glyma.13G296600 10.0kb upstream 10.0kb upstream 14418 true Chr13: 39558037-39572454 Glycine max
Glyma.13G296600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39558037-39568036 Glycine max
Glyma.13G296600 10.0kb downstream 10.0kb downstream 14418 true Chr13: 39568037-39582454 Glycine max
Glyma.13G296600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39572455-39582454 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53993 0.0 20.658    
cufflinks 11.1605 0.0 29.9391    
cufflinks 10.2716 0.0 27.6157    
cufflinks 12.3668 0.0 33.0736   High
cufflinks 1.23538 0.0 4.23678   Low
cufflinks 1.71929 0.0 5.64819    
cufflinks 2.94038 0.0 8.98502    
cufflinks 10.479 0.0 28.165    
cufflinks 1.29492 0.0 4.40846   Low
cufflinks 5.523        
cufflinks 0.052     Low Low
cufflinks 6.095        
cufflinks 0.49        
cufflinks 0.202        
cufflinks 0.046     Low Low
cufflinks 5.323        
cufflinks 0.693        
cufflinks 6.862        
cufflinks 7.928     High High
cufflinks 3.894        
cufflinks 0.205        
cufflinks 5.532        
cufflinks 4.315        
cufflinks 0.172        
cufflinks 4.759        
cufflinks 0.123       Low

0 Strain