Gene : Glyma.13G338300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER Genomic Order:  3383
Name:  ? Glyma.13G338300 Secondary Identifier:  ? PAC:30505839
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G338300 0.5kb upstream 0.5kb upstream 2408 true Chr13: 43095183-43097590 Glycine max
Glyma.13G338300 0.5kb upstream 0.5kb upstream 500 false Chr13: 43097091-43097590 Glycine max
Glyma.13G338300 0.5kb downstream 0.5kb downstream 2408 true Chr13: 43094683-43097090 Glycine max
Glyma.13G338300 0.5kb downstream 0.5kb downstream 500 false Chr13: 43094683-43095182 Glycine max
Glyma.13G338300 1.0kb upstream 1.0kb upstream 2908 true Chr13: 43095183-43098090 Glycine max
Glyma.13G338300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43097091-43098090 Glycine max
Glyma.13G338300 1.0kb downstream 1.0kb downstream 2908 true Chr13: 43094183-43097090 Glycine max
Glyma.13G338300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43094183-43095182 Glycine max
Glyma.13G338300 2.0kb upstream 2.0kb upstream 3908 true Chr13: 43095183-43099090 Glycine max
Glyma.13G338300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43097091-43099090 Glycine max
Glyma.13G338300 2.0kb downstream 2.0kb downstream 3908 true Chr13: 43093183-43097090 Glycine max
Glyma.13G338300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43093183-43095182 Glycine max
Glyma.13G338300 5.0kb upstream 5.0kb upstream 6908 true Chr13: 43095183-43102090 Glycine max
Glyma.13G338300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43097091-43102090 Glycine max
Glyma.13G338300 5.0kb downstream 5.0kb downstream 6908 true Chr13: 43090183-43097090 Glycine max
Glyma.13G338300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43090183-43095182 Glycine max
Glyma.13G338300 10.0kb upstream 10.0kb upstream 11908 true Chr13: 43095183-43107090 Glycine max
Glyma.13G338300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43097091-43107090 Glycine max
Glyma.13G338300 10.0kb downstream 10.0kb downstream 11908 true Chr13: 43085183-43097090 Glycine max
Glyma.13G338300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43085183-43095182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303991 5265 Fabidae View MSA
124065835 5270 Rosid View MSA
123739218 5271 Pentapetalae View MSA
122792201 5272 Eudicot View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0552342 0.0 0.228622 Low  
cufflinks 0.144819 0.0 0.57429 Low  
cufflinks 0.430727 0.0 1.63274    
cufflinks 0.395437 0.0 1.50524    
cufflinks 36.5066 0.0 97.8515 High High
cufflinks 22.4271 0.0 59.9239   High
cufflinks 0.0402283 0.0 0.17021 Low Low
cufflinks 0.0764725 0.0 0.310942 Low  
cufflinks 6.51435 0.0 19.2159    
cufflinks 0.197        
cufflinks 3.98        
cufflinks 0.046     Low Low
cufflinks 12.92     High High
cufflinks 4.501        
cufflinks 0.887        
cufflinks 0.193        
cufflinks 43.323     High High
cufflinks 0.085     Low Low
cufflinks 1.86        
cufflinks 0.113       Low
cufflinks 3.527        
cufflinks 0.3        
cufflinks 0.683        
cufflinks 3.221        
cufflinks 0.16        
cufflinks 17.877     High High

0 Strain