Gene : Glyma.13G339400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526:SF364 - GLYCOSYL TRANSFERASE FAMILY PROTEIN Genomic Order:  3394
Name:  ? Glyma.13G339400 Secondary Identifier:  ? PAC:30500161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G339400 0.5kb upstream 0.5kb upstream 1955 true Chr13: 43148955-43150909 Glycine max
Glyma.13G339400 0.5kb upstream 0.5kb upstream 500 false Chr13: 43150410-43150909 Glycine max
Glyma.13G339400 0.5kb downstream 0.5kb downstream 1955 true Chr13: 43148455-43150409 Glycine max
Glyma.13G339400 0.5kb downstream 0.5kb downstream 500 false Chr13: 43148455-43148954 Glycine max
Glyma.13G339400 1.0kb upstream 1.0kb upstream 2455 true Chr13: 43148955-43151409 Glycine max
Glyma.13G339400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43150410-43151409 Glycine max
Glyma.13G339400 1.0kb downstream 1.0kb downstream 2455 true Chr13: 43147955-43150409 Glycine max
Glyma.13G339400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43147955-43148954 Glycine max
Glyma.13G339400 2.0kb upstream 2.0kb upstream 3455 true Chr13: 43148955-43152409 Glycine max
Glyma.13G339400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43150410-43152409 Glycine max
Glyma.13G339400 2.0kb downstream 2.0kb downstream 3455 true Chr13: 43146955-43150409 Glycine max
Glyma.13G339400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43146955-43148954 Glycine max
Glyma.13G339400 5.0kb upstream 5.0kb upstream 6455 true Chr13: 43148955-43155409 Glycine max
Glyma.13G339400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43150410-43155409 Glycine max
Glyma.13G339400 5.0kb downstream 5.0kb downstream 6455 true Chr13: 43143955-43150409 Glycine max
Glyma.13G339400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43143955-43148954 Glycine max
Glyma.13G339400 10.0kb upstream 10.0kb upstream 11455 true Chr13: 43148955-43160409 Glycine max
Glyma.13G339400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43150410-43160409 Glycine max
Glyma.13G339400 10.0kb downstream 10.0kb downstream 11455 true Chr13: 43138955-43150409 Glycine max
Glyma.13G339400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43138955-43148954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305628 5265 Fabidae View MSA
124067109 5270 Rosid View MSA
123737440 5271 Pentapetalae View MSA
122788873 5272 Eudicot View MSA
122049577 5273 Angiosperm View MSA
121345935 5274 Embryophyte View MSA
123380294 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142594 0.0 0.562515 Low Low
cufflinks 0.123069 0.0 0.488038 Low Low
cufflinks 2.25699 0.0 7.52493   High
cufflinks 0.858305 0.0 3.11683    
cufflinks 0.811498 0.0 2.95935    
cufflinks 1.20204 0.0 4.27148    
cufflinks 0.225318 0.0 0.872402    
cufflinks 1.11675 0.0 3.98172    
cufflinks 1.27312 0.0 4.49934    
cufflinks 0.222        
cufflinks 0.068        
cufflinks 0.181        
cufflinks 1.569       High
cufflinks 1.455       High
cufflinks 0.025     Low  
cufflinks 0.014     Low Low
cufflinks 0.128        
cufflinks 0.361        
cufflinks 0.068     Low  
cufflinks 0.024     Low  
cufflinks 0.017     Low Low
cufflinks 0.03     Low  
cufflinks 0.047     Low  
cufflinks 0.066        
cufflinks 0.015     Low Low
cufflinks 0.14        

0 Strain