Gene : Glyma.13G341200 G. max Wm82.a2.v1
Defline:  (1 of 3) PF16053 - Mitochondrial 28S ribosomal protein S34 (MRP-S34) Genomic Order:  3412
Name:  ? Glyma.13G341200 Secondary Identifier:  ? PAC:30503839
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G341200 0.5kb upstream 0.5kb upstream 2162 true Chr13: 43300318-43302479 Glycine max
Glyma.13G341200 0.5kb upstream 0.5kb upstream 500 false Chr13: 43301980-43302479 Glycine max
Glyma.13G341200 0.5kb downstream 0.5kb downstream 2162 true Chr13: 43299818-43301979 Glycine max
Glyma.13G341200 0.5kb downstream 0.5kb downstream 500 false Chr13: 43299818-43300317 Glycine max
Glyma.13G341200 1.0kb upstream 1.0kb upstream 2662 true Chr13: 43300318-43302979 Glycine max
Glyma.13G341200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43301980-43302979 Glycine max
Glyma.13G341200 1.0kb downstream 1.0kb downstream 2662 true Chr13: 43299318-43301979 Glycine max
Glyma.13G341200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43299318-43300317 Glycine max
Glyma.13G341200 2.0kb upstream 2.0kb upstream 3662 true Chr13: 43300318-43303979 Glycine max
Glyma.13G341200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43301980-43303979 Glycine max
Glyma.13G341200 2.0kb downstream 2.0kb downstream 3662 true Chr13: 43298318-43301979 Glycine max
Glyma.13G341200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43298318-43300317 Glycine max
Glyma.13G341200 5.0kb upstream 5.0kb upstream 6662 true Chr13: 43300318-43306979 Glycine max
Glyma.13G341200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43301980-43306979 Glycine max
Glyma.13G341200 5.0kb downstream 5.0kb downstream 6662 true Chr13: 43295318-43301979 Glycine max
Glyma.13G341200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43295318-43300317 Glycine max
Glyma.13G341200 10.0kb upstream 10.0kb upstream 11662 true Chr13: 43300318-43311979 Glycine max
Glyma.13G341200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43301980-43311979 Glycine max
Glyma.13G341200 10.0kb downstream 10.0kb downstream 11662 true Chr13: 43290318-43301979 Glycine max
Glyma.13G341200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43290318-43300317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314231 5265 Fabidae View MSA
124062726 5270 Rosid View MSA
123743415 5271 Pentapetalae View MSA
122794172 5272 Eudicot View MSA
122043343 5273 Angiosperm View MSA
121350318 5274 Embryophyte View MSA
123423853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.20238 0.0 37.897    
cufflinks 8.57213 0.0 36.333    
cufflinks 5.03141 0.0 16.6534   Low
cufflinks 6.94015 0.0 26.5216    
cufflinks 11.4721 0.0 46.158   High
cufflinks 9.4913 0.0 33.6918    
cufflinks 8.97478 0.0 37.5083    
cufflinks 11.7603 0.0 45.2309   High
cufflinks 8.64393 0.0 36.3823    
cufflinks 3.03        
cufflinks 1.366       Low
cufflinks 2.248        
cufflinks 4.734       High
cufflinks 6.308       High
cufflinks 2.206        
cufflinks 4.05       High
cufflinks 1.28       Low
cufflinks 1.896        
cufflinks 2.474        
cufflinks 3.422        
cufflinks 2.153        
cufflinks 2.724        
cufflinks 2.309        
cufflinks 2.025        
cufflinks 3.778        
cufflinks 1.756        

0 Strain