Gene : Glyma.13G362200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  3622
Name:  ? Glyma.13G362200 Secondary Identifier:  ? PAC:30503951
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G362200 0.5kb upstream 0.5kb upstream 3226 true Chr13: 44889546-44892771 Glycine max
Glyma.13G362200 0.5kb upstream 0.5kb upstream 500 false Chr13: 44892272-44892771 Glycine max
Glyma.13G362200 0.5kb downstream 0.5kb downstream 3226 true Chr13: 44889046-44892271 Glycine max
Glyma.13G362200 0.5kb downstream 0.5kb downstream 500 false Chr13: 44889046-44889545 Glycine max
Glyma.13G362200 1.0kb upstream 1.0kb upstream 3726 true Chr13: 44889546-44893271 Glycine max
Glyma.13G362200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44892272-44893271 Glycine max
Glyma.13G362200 1.0kb downstream 1.0kb downstream 3726 true Chr13: 44888546-44892271 Glycine max
Glyma.13G362200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44888546-44889545 Glycine max
Glyma.13G362200 2.0kb upstream 2.0kb upstream 4726 true Chr13: 44889546-44894271 Glycine max
Glyma.13G362200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44892272-44894271 Glycine max
Glyma.13G362200 2.0kb downstream 2.0kb downstream 4726 true Chr13: 44887546-44892271 Glycine max
Glyma.13G362200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44887546-44889545 Glycine max
Glyma.13G362200 5.0kb upstream 5.0kb upstream 7726 true Chr13: 44889546-44897271 Glycine max
Glyma.13G362200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44892272-44897271 Glycine max
Glyma.13G362200 5.0kb downstream 5.0kb downstream 7726 true Chr13: 44884546-44892271 Glycine max
Glyma.13G362200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44884546-44889545 Glycine max
Glyma.13G362200 10.0kb upstream 10.0kb upstream 12726 true Chr13: 44889546-44902271 Glycine max
Glyma.13G362200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44892272-44902271 Glycine max
Glyma.13G362200 10.0kb downstream 10.0kb downstream 12726 true Chr13: 44879546-44892271 Glycine max
Glyma.13G362200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44879546-44889545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313686 5265 Fabidae View MSA
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9152 0.0 31.9808    
cufflinks 2.88465 0.0 8.93735    
cufflinks 2.93529 0.0 9.05644    
cufflinks 9.72378 0.0 26.3363    
cufflinks 1.36199 0.0 4.65449    
cufflinks 0.236618 0.0 0.902667 Low Low
cufflinks 88.3604 0.0 273.645 High High
cufflinks 2.02287 0.0 6.5636    
cufflinks 4.26934 0.0 12.5014    
cufflinks 0.053     Low Low
cufflinks 0.242        
cufflinks 2.566        
cufflinks 0.683        
cufflinks 0.009     Low Low
cufflinks 2.304        
cufflinks 1.905        
cufflinks 0.347        
cufflinks 1.062        
cufflinks 2.147        
cufflinks 2.285        
cufflinks 0.113        
cufflinks 3.177        
cufflinks 3.752       High
cufflinks 0.112        
cufflinks 1.986        
cufflinks 0.026     Low Low

0 Strain