Gene : Glyma.13G356700 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3567
Name:  ? Glyma.13G356700 Secondary Identifier:  ? PAC:30504565
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G356700 0.5kb upstream 0.5kb upstream 3876 true Chr13: 44482766-44486641 Glycine max
Glyma.13G356700 0.5kb upstream 0.5kb upstream 500 false Chr13: 44482766-44483265 Glycine max
Glyma.13G356700 0.5kb downstream 0.5kb downstream 3876 true Chr13: 44483266-44487141 Glycine max
Glyma.13G356700 0.5kb downstream 0.5kb downstream 500 false Chr13: 44486642-44487141 Glycine max
Glyma.13G356700 1.0kb upstream 1.0kb upstream 4376 true Chr13: 44482266-44486641 Glycine max
Glyma.13G356700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44482266-44483265 Glycine max
Glyma.13G356700 1.0kb downstream 1.0kb downstream 4376 true Chr13: 44483266-44487641 Glycine max
Glyma.13G356700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44486642-44487641 Glycine max
Glyma.13G356700 2.0kb upstream 2.0kb upstream 5376 true Chr13: 44481266-44486641 Glycine max
Glyma.13G356700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44481266-44483265 Glycine max
Glyma.13G356700 2.0kb downstream 2.0kb downstream 5376 true Chr13: 44483266-44488641 Glycine max
Glyma.13G356700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44486642-44488641 Glycine max
Glyma.13G356700 5.0kb upstream 5.0kb upstream 8376 true Chr13: 44478266-44486641 Glycine max
Glyma.13G356700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44478266-44483265 Glycine max
Glyma.13G356700 5.0kb downstream 5.0kb downstream 8376 true Chr13: 44483266-44491641 Glycine max
Glyma.13G356700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44486642-44491641 Glycine max
Glyma.13G356700 10.0kb upstream 10.0kb upstream 13376 true Chr13: 44473266-44486641 Glycine max
Glyma.13G356700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44473266-44483265 Glycine max
Glyma.13G356700 10.0kb downstream 10.0kb downstream 13376 true Chr13: 44483266-44496641 Glycine max
Glyma.13G356700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44486642-44496641 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305180 5265 Fabidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.57884 0.0 17.8102    
cufflinks 8.16242 0.0 21.9061    
cufflinks 5.98046 0.0 16.2766   Low
cufflinks 7.36689 0.0 19.8312    
cufflinks 10.4207 0.0 27.8101   High
cufflinks 7.54912 0.0 20.3018    
cufflinks 10.2346 0.0 27.3192   High
cufflinks 5.7555 0.0 15.7099   Low
cufflinks 8.05781 0.0 21.6269    
cufflinks 7.774     High  
cufflinks 3.518       Low
cufflinks 9.636     High  
cufflinks 12.227     High High
cufflinks 16.185     High High
cufflinks 2.884       Low
cufflinks 6.599        
cufflinks 6.358     High  
cufflinks 10.105     High  
cufflinks 10.147     High  
cufflinks 7.222     High  
cufflinks 2.569       Low
cufflinks 7.502     High  
cufflinks 10.901     High  
cufflinks 3.507       Low
cufflinks 6.569        
cufflinks 3.044       Low

0 Strain