Gene : Glyma.13G357100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  3571
Name:  ? Glyma.13G357100 Secondary Identifier:  ? PAC:30503590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G357100 0.5kb upstream 0.5kb upstream 7168 true Chr13: 44513495-44520662 Glycine max
Glyma.13G357100 0.5kb upstream 0.5kb upstream 500 false Chr13: 44513495-44513994 Glycine max
Glyma.13G357100 0.5kb downstream 0.5kb downstream 7168 true Chr13: 44513995-44521162 Glycine max
Glyma.13G357100 0.5kb downstream 0.5kb downstream 500 false Chr13: 44520663-44521162 Glycine max
Glyma.13G357100 1.0kb upstream 1.0kb upstream 7668 true Chr13: 44512995-44520662 Glycine max
Glyma.13G357100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44512995-44513994 Glycine max
Glyma.13G357100 1.0kb downstream 1.0kb downstream 7668 true Chr13: 44513995-44521662 Glycine max
Glyma.13G357100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44520663-44521662 Glycine max
Glyma.13G357100 2.0kb upstream 2.0kb upstream 8668 true Chr13: 44511995-44520662 Glycine max
Glyma.13G357100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44511995-44513994 Glycine max
Glyma.13G357100 2.0kb downstream 2.0kb downstream 8668 true Chr13: 44513995-44522662 Glycine max
Glyma.13G357100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44520663-44522662 Glycine max
Glyma.13G357100 5.0kb upstream 5.0kb upstream 11668 true Chr13: 44508995-44520662 Glycine max
Glyma.13G357100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44508995-44513994 Glycine max
Glyma.13G357100 5.0kb downstream 5.0kb downstream 11668 true Chr13: 44513995-44525662 Glycine max
Glyma.13G357100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44520663-44525662 Glycine max
Glyma.13G357100 10.0kb upstream 10.0kb upstream 16668 true Chr13: 44503995-44520662 Glycine max
Glyma.13G357100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44503995-44513994 Glycine max
Glyma.13G357100 10.0kb downstream 10.0kb downstream 16668 true Chr13: 44513995-44530662 Glycine max
Glyma.13G357100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44520663-44530662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304917 5265 Fabidae View MSA
124070351 5270 Rosid View MSA
123746219 5271 Pentapetalae View MSA
122794350 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.726195 0.0 2.92879    
cufflinks 5.30389 0.0 20.9548    
cufflinks 14.6118 0.0 56.3084   High
cufflinks 4.11338 0.0 16.9624    
cufflinks 0.226113 0.0 1.43739 Low  
cufflinks 0.38339 0.0 2.26221    
cufflinks 10.5185 0.0 39.7577   High
cufflinks 0.534889 0.0 3.04249    
cufflinks 0.0332949 0.0 0.134878 Low Low
cufflinks 0.071     Low  
cufflinks 0.005     Low Low
cufflinks 1.554       High
cufflinks 0.006     Low Low
cufflinks 0.004     Low Low
cufflinks 0.024     Low  
cufflinks 0.279        
cufflinks 0.034     Low  
cufflinks 1.539       High
cufflinks 0.94       High
cufflinks 0.391        
cufflinks 0.009     Low Low
cufflinks 0.435        
cufflinks 0.677        
cufflinks 0.005     Low Low
cufflinks 0.388        
cufflinks 0.051     Low  

0 Strain