Gene : Glyma.13G348800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  3488
Name:  ? Glyma.13G348800 Secondary Identifier:  ? PAC:30501749
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G348800 0.5kb upstream 0.5kb upstream 3509 true Chr13: 43881656-43885164 Glycine max
Glyma.13G348800 0.5kb upstream 0.5kb upstream 500 false Chr13: 43884665-43885164 Glycine max
Glyma.13G348800 0.5kb downstream 0.5kb downstream 3509 true Chr13: 43881156-43884664 Glycine max
Glyma.13G348800 0.5kb downstream 0.5kb downstream 500 false Chr13: 43881156-43881655 Glycine max
Glyma.13G348800 1.0kb upstream 1.0kb upstream 4009 true Chr13: 43881656-43885664 Glycine max
Glyma.13G348800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43884665-43885664 Glycine max
Glyma.13G348800 1.0kb downstream 1.0kb downstream 4009 true Chr13: 43880656-43884664 Glycine max
Glyma.13G348800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43880656-43881655 Glycine max
Glyma.13G348800 2.0kb upstream 2.0kb upstream 5009 true Chr13: 43881656-43886664 Glycine max
Glyma.13G348800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43884665-43886664 Glycine max
Glyma.13G348800 2.0kb downstream 2.0kb downstream 5009 true Chr13: 43879656-43884664 Glycine max
Glyma.13G348800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43879656-43881655 Glycine max
Glyma.13G348800 5.0kb upstream 5.0kb upstream 8009 true Chr13: 43881656-43889664 Glycine max
Glyma.13G348800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43884665-43889664 Glycine max
Glyma.13G348800 5.0kb downstream 5.0kb downstream 8009 true Chr13: 43876656-43884664 Glycine max
Glyma.13G348800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43876656-43881655 Glycine max
Glyma.13G348800 10.0kb upstream 10.0kb upstream 13009 true Chr13: 43881656-43894664 Glycine max
Glyma.13G348800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43884665-43894664 Glycine max
Glyma.13G348800 10.0kb downstream 10.0kb downstream 13009 true Chr13: 43871656-43884664 Glycine max
Glyma.13G348800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43871656-43881655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303442 5265 Fabidae View MSA
124064192 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.56363 0.0 17.2117    
cufflinks 2.78731 0.0 9.44113    
cufflinks 6.04792 0.0 25.2413    
cufflinks 7.33477 0.0 28.8005   High
cufflinks 1.75045 0.0 6.74819   Low
cufflinks 1.59517 0.0 8.34103   Low
cufflinks 5.38685 0.0 19.3281    
cufflinks 6.55524 0.0 22.3793    
cufflinks 5.02684 0.0 22.1595    
cufflinks 0.436        
cufflinks 0.785        
cufflinks 1.577       High
cufflinks 0.241       Low
cufflinks 0.208       Low
cufflinks 1.379       High
cufflinks 0.683        
cufflinks 0.573        
cufflinks 1.807       High
cufflinks 0.94        
cufflinks 0.602        
cufflinks 0.877        
cufflinks 0.684        
cufflinks 0.633        
cufflinks 1.588       High
cufflinks 0.674        
cufflinks 0.626        

0 Strain