Gene : Glyma.13G347400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15371//PTHR15371:SF7 - TIM23 Genomic Order:  3474
Name:  ? Glyma.13G347400 Secondary Identifier:  ? PAC:30503122
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G347400 0.5kb upstream 0.5kb upstream 1765 true Chr13: 43757396-43759160 Glycine max
Glyma.13G347400 0.5kb upstream 0.5kb upstream 500 false Chr13: 43757396-43757895 Glycine max
Glyma.13G347400 0.5kb downstream 0.5kb downstream 1765 true Chr13: 43757896-43759660 Glycine max
Glyma.13G347400 0.5kb downstream 0.5kb downstream 500 false Chr13: 43759161-43759660 Glycine max
Glyma.13G347400 1.0kb upstream 1.0kb upstream 2265 true Chr13: 43756896-43759160 Glycine max
Glyma.13G347400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43756896-43757895 Glycine max
Glyma.13G347400 1.0kb downstream 1.0kb downstream 2265 true Chr13: 43757896-43760160 Glycine max
Glyma.13G347400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43759161-43760160 Glycine max
Glyma.13G347400 2.0kb upstream 2.0kb upstream 3265 true Chr13: 43755896-43759160 Glycine max
Glyma.13G347400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43755896-43757895 Glycine max
Glyma.13G347400 2.0kb downstream 2.0kb downstream 3265 true Chr13: 43757896-43761160 Glycine max
Glyma.13G347400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43759161-43761160 Glycine max
Glyma.13G347400 5.0kb upstream 5.0kb upstream 6265 true Chr13: 43752896-43759160 Glycine max
Glyma.13G347400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43752896-43757895 Glycine max
Glyma.13G347400 5.0kb downstream 5.0kb downstream 6265 true Chr13: 43757896-43764160 Glycine max
Glyma.13G347400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43759161-43764160 Glycine max
Glyma.13G347400 10.0kb upstream 10.0kb upstream 11265 true Chr13: 43747896-43759160 Glycine max
Glyma.13G347400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43747896-43757895 Glycine max
Glyma.13G347400 10.0kb downstream 10.0kb downstream 11265 true Chr13: 43757896-43769160 Glycine max
Glyma.13G347400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43759161-43769160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314044 5265 Fabidae View MSA
124060899 5270 Rosid View MSA
123742035 5271 Pentapetalae View MSA
122795290 5272 Eudicot View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.54354 0.0 27.1567    
cufflinks 5.77002 0.0 17.6315    
cufflinks 4.57842 0.0 14.6052   Low
cufflinks 7.1237 0.0 21.1076    
cufflinks 11.7212 0.0 32.407   High
cufflinks 8.02309 0.0 23.2315    
cufflinks 7.29038 0.0 21.3399    
cufflinks 7.56092 0.0 22.2633    
cufflinks 7.90699 0.0 22.9835    
cufflinks 3.978       High
cufflinks 1.953        
cufflinks 2.306        
cufflinks 4.934       High
cufflinks 6.823     High High
cufflinks 1.726        
cufflinks 1.276        
cufflinks 4.331       High
cufflinks 2.706        
cufflinks 2.25        
cufflinks 1.007       Low
cufflinks 1.429        
cufflinks 1.388        
cufflinks 2.452        
cufflinks 2.17        
cufflinks 0.672       Low
cufflinks 2.274        

0 Strain