Gene : Glyma.13G371600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  3716
Name:  ? Glyma.13G371600 Secondary Identifier:  ? PAC:30503406
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G371600 0.5kb upstream 0.5kb upstream 5605 true Chr13: 45672351-45677955 Glycine max
Glyma.13G371600 0.5kb upstream 0.5kb upstream 500 false Chr13: 45677456-45677955 Glycine max
Glyma.13G371600 0.5kb downstream 0.5kb downstream 5605 true Chr13: 45671851-45677455 Glycine max
Glyma.13G371600 0.5kb downstream 0.5kb downstream 500 false Chr13: 45671851-45672350 Glycine max
Glyma.13G371600 1.0kb upstream 1.0kb upstream 6105 true Chr13: 45672351-45678455 Glycine max
Glyma.13G371600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45677456-45678455 Glycine max
Glyma.13G371600 1.0kb downstream 1.0kb downstream 6105 true Chr13: 45671351-45677455 Glycine max
Glyma.13G371600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45671351-45672350 Glycine max
Glyma.13G371600 2.0kb upstream 2.0kb upstream 7105 true Chr13: 45672351-45679455 Glycine max
Glyma.13G371600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45677456-45679455 Glycine max
Glyma.13G371600 2.0kb downstream 2.0kb downstream 7105 true Chr13: 45670351-45677455 Glycine max
Glyma.13G371600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45670351-45672350 Glycine max
Glyma.13G371600 5.0kb upstream 5.0kb upstream 10105 true Chr13: 45672351-45682455 Glycine max
Glyma.13G371600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45677456-45682455 Glycine max
Glyma.13G371600 5.0kb downstream 5.0kb downstream 10105 true Chr13: 45667351-45677455 Glycine max
Glyma.13G371600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45667351-45672350 Glycine max
Glyma.13G371600 10.0kb upstream 10.0kb upstream 15105 true Chr13: 45672351-45687455 Glycine max
Glyma.13G371600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45677456-45687455 Glycine max
Glyma.13G371600 10.0kb downstream 10.0kb downstream 15105 true Chr13: 45662351-45677455 Glycine max
Glyma.13G371600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45662351-45672350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312076 5265 Fabidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56097 0.0 8.90289   Low
cufflinks 8.68067 0.0 33.6245    
cufflinks 3.14223 0.0 10.2348   Low
cufflinks 6.99636 0.0 23.4841    
cufflinks 7.78725 0.0 25.6378    
cufflinks 7.51839 0.0 24.839    
cufflinks 9.85891 0.0 37.4947    
cufflinks 7.02365 0.0 23.596    
cufflinks 7.07179 0.0 23.7848    
cufflinks 1.107        
cufflinks 0.126       Low
cufflinks 0.723        
cufflinks 1.37       High
cufflinks 2.056       High
cufflinks 0.21       Low
cufflinks 0.762        
cufflinks 0.504        
cufflinks 1.005        
cufflinks 1.249        
cufflinks 0.672        
cufflinks 0.226       Low
cufflinks 0.76        
cufflinks 1.366       High
cufflinks 0.275       Low
cufflinks 0.69        
cufflinks 0.332        

0 Strain