Gene : Glyma.14G052000 G. max Wm82.a2.v1
Defline:  (1 of 12) PF07172 - Glycine rich protein family (GRP) Genomic Order:  520
Name:  ? Glyma.14G052000 Secondary Identifier:  ? PAC:30532963
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G052000 0.5kb upstream 0.5kb upstream 1769 true Chr14: 4084057-4085825 Glycine max
Glyma.14G052000 0.5kb upstream 0.5kb upstream 500 false Chr14: 4084057-4084556 Glycine max
Glyma.14G052000 0.5kb downstream 0.5kb downstream 1769 true Chr14: 4084557-4086325 Glycine max
Glyma.14G052000 0.5kb downstream 0.5kb downstream 500 false Chr14: 4085826-4086325 Glycine max
Glyma.14G052000 1.0kb upstream 1.0kb upstream 2269 true Chr14: 4083557-4085825 Glycine max
Glyma.14G052000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4083557-4084556 Glycine max
Glyma.14G052000 1.0kb downstream 1.0kb downstream 2269 true Chr14: 4084557-4086825 Glycine max
Glyma.14G052000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4085826-4086825 Glycine max
Glyma.14G052000 2.0kb upstream 2.0kb upstream 3269 true Chr14: 4082557-4085825 Glycine max
Glyma.14G052000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4082557-4084556 Glycine max
Glyma.14G052000 2.0kb downstream 2.0kb downstream 3269 true Chr14: 4084557-4087825 Glycine max
Glyma.14G052000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4085826-4087825 Glycine max
Glyma.14G052000 5.0kb upstream 5.0kb upstream 6269 true Chr14: 4079557-4085825 Glycine max
Glyma.14G052000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4079557-4084556 Glycine max
Glyma.14G052000 5.0kb downstream 5.0kb downstream 6269 true Chr14: 4084557-4090825 Glycine max
Glyma.14G052000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4085826-4090825 Glycine max
Glyma.14G052000 10.0kb upstream 10.0kb upstream 11269 true Chr14: 4074557-4085825 Glycine max
Glyma.14G052000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4074557-4084556 Glycine max
Glyma.14G052000 10.0kb downstream 10.0kb downstream 11269 true Chr14: 4084557-4095825 Glycine max
Glyma.14G052000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4085826-4095825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312901 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.968 0.0 334.605 High  
cufflinks 860.474 0.0 3445.48 High High
cufflinks 269.114 0.0 823.034 High  
cufflinks 0.14162 0.0 0.578349 Low Low
cufflinks 198.387 0.0 584.747 High  
cufflinks 551.56 0.0 1979.88 High  
cufflinks 1.99727 0.0 7.24872    
cufflinks 77.5073 0.0 207.985 High  
cufflinks 0.656358 0.0 2.51825   Low
cufflinks 53.56     High  
cufflinks 0.249        
cufflinks 129.795     High  
cufflinks 0.127       Low
cufflinks 0.166       Low
cufflinks 1.805        
cufflinks 466.132     High High
cufflinks 0.014     Low Low
cufflinks 69.269     High  
cufflinks 352.92     High  
cufflinks 661.701     High High
cufflinks 0.613        
cufflinks 530.017     High High
cufflinks 301.708     High  
cufflinks 0.531        
cufflinks 478.41     High High
cufflinks 0.034     Low Low

0 Strain