Gene : Glyma.14G052200 G. max Wm82.a2.v1
Defline:  (1 of 12) PF07172 - Glycine rich protein family (GRP) Genomic Order:  522
Name:  ? Glyma.14G052200 Secondary Identifier:  ? PAC:30533911
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G052200 0.5kb upstream 0.5kb upstream 2554 true Chr14: 4117504-4120057 Glycine max
Glyma.14G052200 0.5kb upstream 0.5kb upstream 500 false Chr14: 4117504-4118003 Glycine max
Glyma.14G052200 0.5kb downstream 0.5kb downstream 2554 true Chr14: 4118004-4120557 Glycine max
Glyma.14G052200 0.5kb downstream 0.5kb downstream 500 false Chr14: 4120058-4120557 Glycine max
Glyma.14G052200 1.0kb upstream 1.0kb upstream 3054 true Chr14: 4117004-4120057 Glycine max
Glyma.14G052200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4117004-4118003 Glycine max
Glyma.14G052200 1.0kb downstream 1.0kb downstream 3054 true Chr14: 4118004-4121057 Glycine max
Glyma.14G052200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4120058-4121057 Glycine max
Glyma.14G052200 2.0kb upstream 2.0kb upstream 4054 true Chr14: 4116004-4120057 Glycine max
Glyma.14G052200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4116004-4118003 Glycine max
Glyma.14G052200 2.0kb downstream 2.0kb downstream 4054 true Chr14: 4118004-4122057 Glycine max
Glyma.14G052200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4120058-4122057 Glycine max
Glyma.14G052200 5.0kb upstream 5.0kb upstream 7054 true Chr14: 4113004-4120057 Glycine max
Glyma.14G052200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4113004-4118003 Glycine max
Glyma.14G052200 5.0kb downstream 5.0kb downstream 7054 true Chr14: 4118004-4125057 Glycine max
Glyma.14G052200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4120058-4125057 Glycine max
Glyma.14G052200 10.0kb upstream 10.0kb upstream 12054 true Chr14: 4108004-4120057 Glycine max
Glyma.14G052200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4108004-4118003 Glycine max
Glyma.14G052200 10.0kb downstream 10.0kb downstream 12054 true Chr14: 4118004-4130057 Glycine max
Glyma.14G052200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4120058-4130057 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315286 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17869 0.0 5.81342    
cufflinks 14.2154 0.0 54.2857   High
cufflinks 6.54568 0.0 28.3084    
cufflinks 2.26547 0.0 13.1019    
cufflinks 0.222092 0.0 0.897106 Low Low
cufflinks 3.46813 0.0 15.2199    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01159 0.0 4.8421    
cufflinks 2.19793 0.0 12.5828    
cufflinks 0.154       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.201       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.202       Low
cufflinks 0.612        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.492        
cufflinks 2.222       High
cufflinks 0.675        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.666        
cufflinks 0.817        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.573        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain