Gene : Glyma.14G046700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33271:SF7 - PLASTID TRANSCRIPTIONALLY ACTIVE 18 Genomic Order:  467
Name:  ? Glyma.14G046700 Secondary Identifier:  ? PAC:30533330
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G046700 0.5kb upstream 0.5kb upstream 2108 true Chr14: 3554569-3556676 Glycine max
Glyma.14G046700 0.5kb upstream 0.5kb upstream 500 false Chr14: 3554569-3555068 Glycine max
Glyma.14G046700 0.5kb downstream 0.5kb downstream 2108 true Chr14: 3555069-3557176 Glycine max
Glyma.14G046700 0.5kb downstream 0.5kb downstream 500 false Chr14: 3556677-3557176 Glycine max
Glyma.14G046700 1.0kb upstream 1.0kb upstream 2608 true Chr14: 3554069-3556676 Glycine max
Glyma.14G046700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3554069-3555068 Glycine max
Glyma.14G046700 1.0kb downstream 1.0kb downstream 2608 true Chr14: 3555069-3557676 Glycine max
Glyma.14G046700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3556677-3557676 Glycine max
Glyma.14G046700 2.0kb upstream 2.0kb upstream 3608 true Chr14: 3553069-3556676 Glycine max
Glyma.14G046700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3553069-3555068 Glycine max
Glyma.14G046700 2.0kb downstream 2.0kb downstream 3608 true Chr14: 3555069-3558676 Glycine max
Glyma.14G046700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3556677-3558676 Glycine max
Glyma.14G046700 5.0kb upstream 5.0kb upstream 6608 true Chr14: 3550069-3556676 Glycine max
Glyma.14G046700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3550069-3555068 Glycine max
Glyma.14G046700 5.0kb downstream 5.0kb downstream 6608 true Chr14: 3555069-3561676 Glycine max
Glyma.14G046700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3556677-3561676 Glycine max
Glyma.14G046700 10.0kb upstream 10.0kb upstream 11608 true Chr14: 3545069-3556676 Glycine max
Glyma.14G046700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3545069-3555068 Glycine max
Glyma.14G046700 10.0kb downstream 10.0kb downstream 11608 true Chr14: 3555069-3566676 Glycine max
Glyma.14G046700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3556677-3566676 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301617 5265 Fabidae View MSA
124065223 5270 Rosid View MSA
123741295 5271 Pentapetalae View MSA
122787769 5272 Eudicot View MSA
122043400 5273 Angiosperm View MSA
121346471 5274 Embryophyte View MSA
123380389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8271 0.0 43.7201   High
cufflinks 10.5747 0.0 30.3954    
cufflinks 2.90808 0.0 9.90053   Low
cufflinks 4.9766 0.0 15.8308    
cufflinks 4.37831 0.0 14.2312    
cufflinks 7.19376 0.0 21.779    
cufflinks 6.56624 0.0 20.1755    
cufflinks 7.5019 0.0 22.4727    
cufflinks 4.99312 0.0 15.8833    
cufflinks 5.065        
cufflinks 2.118        
cufflinks 4.701        
cufflinks 3.484        
cufflinks 4.162        
cufflinks 1.491       Low
cufflinks 14.192     High High
cufflinks 1.467       Low
cufflinks 4.499        
cufflinks 7.641     High  
cufflinks 11.314     High High
cufflinks 1.472       Low
cufflinks 11.476     High High
cufflinks 14.802     High High
cufflinks 1.233       Low
cufflinks 16.388     High High
cufflinks 1.022       Low

0 Strain