Gene : Glyma.14G133400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13989:SF20 - REPLICATION PROTEIN A 32 KDA SUBUNIT B Genomic Order:  1334
Name:  ? Glyma.14G133400 Secondary Identifier:  ? PAC:30532199
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G133400 0.5kb upstream 0.5kb upstream 4546 true Chr14: 23111745-23116290 Glycine max
Glyma.14G133400 0.5kb upstream 0.5kb upstream 500 false Chr14: 23115791-23116290 Glycine max
Glyma.14G133400 0.5kb downstream 0.5kb downstream 4546 true Chr14: 23111245-23115790 Glycine max
Glyma.14G133400 0.5kb downstream 0.5kb downstream 500 false Chr14: 23111245-23111744 Glycine max
Glyma.14G133400 1.0kb upstream 1.0kb upstream 5046 true Chr14: 23111745-23116790 Glycine max
Glyma.14G133400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 23115791-23116790 Glycine max
Glyma.14G133400 1.0kb downstream 1.0kb downstream 5046 true Chr14: 23110745-23115790 Glycine max
Glyma.14G133400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 23110745-23111744 Glycine max
Glyma.14G133400 2.0kb upstream 2.0kb upstream 6046 true Chr14: 23111745-23117790 Glycine max
Glyma.14G133400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 23115791-23117790 Glycine max
Glyma.14G133400 2.0kb downstream 2.0kb downstream 6046 true Chr14: 23109745-23115790 Glycine max
Glyma.14G133400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 23109745-23111744 Glycine max
Glyma.14G133400 5.0kb upstream 5.0kb upstream 9046 true Chr14: 23111745-23120790 Glycine max
Glyma.14G133400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 23115791-23120790 Glycine max
Glyma.14G133400 5.0kb downstream 5.0kb downstream 9046 true Chr14: 23106745-23115790 Glycine max
Glyma.14G133400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 23106745-23111744 Glycine max
Glyma.14G133400 10.0kb upstream 10.0kb upstream 14046 true Chr14: 23111745-23125790 Glycine max
Glyma.14G133400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 23115791-23125790 Glycine max
Glyma.14G133400 10.0kb downstream 10.0kb downstream 14046 true Chr14: 23101745-23115790 Glycine max
Glyma.14G133400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 23101745-23111744 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304331 5265 Fabidae View MSA
124063788 5270 Rosid View MSA
123740037 5271 Pentapetalae View MSA
122788776 5272 Eudicot View MSA
122049363 5273 Angiosperm View MSA
121347176 5274 Embryophyte View MSA
123425085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45078 0.0 11.0845   Low
cufflinks 21.3915 0.0 57.1835 High High
cufflinks 5.2314 0.0 15.8456    
cufflinks 6.60373 0.0 19.35    
cufflinks 11.9076 0.0 32.7792    
cufflinks 10.2292 0.0 28.5388    
cufflinks 8.77304 0.0 24.909    
cufflinks 8.08648 0.0 23.1061    
cufflinks 14.2071 0.0 38.6236    
cufflinks 1.977        
cufflinks 0.496       Low
cufflinks 1.965        
cufflinks 5.187       High
cufflinks 4.985       High
cufflinks 1.36        
cufflinks 2.682        
cufflinks 1.336        
cufflinks 1.34        
cufflinks 6.438       High
cufflinks 1.902        
cufflinks 1.008        
cufflinks 2.077        
cufflinks 5.715       High
cufflinks 0.89       Low
cufflinks 1.941        
cufflinks 1.282        

0 Strain