Gene : Glyma.14G113600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12294:SF11 - EF-HAND, CALCIUM BINDING MOTIF-CONTAINING PROTEIN Genomic Order:  1136
Name:  ? Glyma.14G113600 Secondary Identifier:  ? PAC:30532960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G113600 0.5kb upstream 0.5kb upstream 3463 true Chr14: 13375021-13378483 Glycine max
Glyma.14G113600 0.5kb upstream 0.5kb upstream 500 false Chr14: 13375021-13375520 Glycine max
Glyma.14G113600 0.5kb downstream 0.5kb downstream 3463 true Chr14: 13375521-13378983 Glycine max
Glyma.14G113600 0.5kb downstream 0.5kb downstream 500 false Chr14: 13378484-13378983 Glycine max
Glyma.14G113600 1.0kb upstream 1.0kb upstream 3963 true Chr14: 13374521-13378483 Glycine max
Glyma.14G113600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 13374521-13375520 Glycine max
Glyma.14G113600 1.0kb downstream 1.0kb downstream 3963 true Chr14: 13375521-13379483 Glycine max
Glyma.14G113600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 13378484-13379483 Glycine max
Glyma.14G113600 2.0kb upstream 2.0kb upstream 4963 true Chr14: 13373521-13378483 Glycine max
Glyma.14G113600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 13373521-13375520 Glycine max
Glyma.14G113600 2.0kb downstream 2.0kb downstream 4963 true Chr14: 13375521-13380483 Glycine max
Glyma.14G113600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 13378484-13380483 Glycine max
Glyma.14G113600 5.0kb upstream 5.0kb upstream 7963 true Chr14: 13370521-13378483 Glycine max
Glyma.14G113600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 13370521-13375520 Glycine max
Glyma.14G113600 5.0kb downstream 5.0kb downstream 7963 true Chr14: 13375521-13383483 Glycine max
Glyma.14G113600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 13378484-13383483 Glycine max
Glyma.14G113600 10.0kb upstream 10.0kb upstream 12963 true Chr14: 13365521-13378483 Glycine max
Glyma.14G113600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 13365521-13375520 Glycine max
Glyma.14G113600 10.0kb downstream 10.0kb downstream 12963 true Chr14: 13375521-13388483 Glycine max
Glyma.14G113600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 13378484-13388483 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246392 5265 Fabidae Singleton cluster - no MSA
124051257 5270 Rosid View MSA
123620085 5271 Pentapetalae View MSA
122654502 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81907 0.0 6.8027    
cufflinks 5.46362 0.0 19.0412   High
cufflinks 1.66428 0.0 6.23868    
cufflinks 1.86461 0.0 6.95552    
cufflinks 0.46732 0.0 1.84741    
cufflinks 0.622949 0.0 2.43819    
cufflinks 0.545486 0.0 2.1467    
cufflinks 2.66598 0.0 9.75757    
cufflinks 0.2734 0.0 1.10259   Low
cufflinks 1.705       High
cufflinks 0.045     Low Low
cufflinks 1.51       High
cufflinks 0.033     Low Low
cufflinks 0.093        
cufflinks 0.142        
cufflinks 0.656        
cufflinks 0.074        
cufflinks 3.442       High
cufflinks 5.366       High
cufflinks 0.572        
cufflinks 0.063        
cufflinks 0.545        
cufflinks 0.478        
cufflinks 0.039     Low Low
cufflinks 0.562        
cufflinks 0.073        

0 Strain