Gene : Glyma.14G108600 G. max Wm82.a2.v1
Defline:  (1 of 52) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1086
Name:  ? Glyma.14G108600 Secondary Identifier:  ? PAC:30532685
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G108600 0.5kb upstream 0.5kb upstream 1859 true Chr14: 11944555-11946413 Glycine max
Glyma.14G108600 0.5kb upstream 0.5kb upstream 500 false Chr14: 11944555-11945054 Glycine max
Glyma.14G108600 0.5kb downstream 0.5kb downstream 1859 true Chr14: 11945055-11946913 Glycine max
Glyma.14G108600 0.5kb downstream 0.5kb downstream 500 false Chr14: 11946414-11946913 Glycine max
Glyma.14G108600 1.0kb upstream 1.0kb upstream 2359 true Chr14: 11944055-11946413 Glycine max
Glyma.14G108600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 11944055-11945054 Glycine max
Glyma.14G108600 1.0kb downstream 1.0kb downstream 2359 true Chr14: 11945055-11947413 Glycine max
Glyma.14G108600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 11946414-11947413 Glycine max
Glyma.14G108600 2.0kb upstream 2.0kb upstream 3359 true Chr14: 11943055-11946413 Glycine max
Glyma.14G108600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 11943055-11945054 Glycine max
Glyma.14G108600 2.0kb downstream 2.0kb downstream 3359 true Chr14: 11945055-11948413 Glycine max
Glyma.14G108600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 11946414-11948413 Glycine max
Glyma.14G108600 5.0kb upstream 5.0kb upstream 6359 true Chr14: 11940055-11946413 Glycine max
Glyma.14G108600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 11940055-11945054 Glycine max
Glyma.14G108600 5.0kb downstream 5.0kb downstream 6359 true Chr14: 11945055-11951413 Glycine max
Glyma.14G108600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 11946414-11951413 Glycine max
Glyma.14G108600 10.0kb upstream 10.0kb upstream 11359 true Chr14: 11935055-11946413 Glycine max
Glyma.14G108600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 11935055-11945054 Glycine max
Glyma.14G108600 10.0kb downstream 10.0kb downstream 11359 true Chr14: 11945055-11956413 Glycine max
Glyma.14G108600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 11946414-11956413 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305220 5265 Fabidae View MSA
124065853 5270 Rosid View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00950695 0.0 0.0451434 Low  
cufflinks 0.0137265 0.0 0.0627418 Low  
cufflinks 8.24072E-4 0.0 0.00757284 Low Low
cufflinks 0.0115257 0.0 0.053546 Low  
cufflinks 0.00554642 0.0 0.0280004 Low  
cufflinks 0.00248109 0.0 0.0144576 Low  
cufflinks 0.0126691 0.0 0.0584936 Low  
cufflinks 0.00671668 0.0 0.0330599 Low  
cufflinks 0.0233497 0.0 0.101739 Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain