Gene : Glyma.14G196400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14211 - GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 Genomic Order:  1964
Name:  ? Glyma.14G196400 Secondary Identifier:  ? PAC:30532526
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G196400 0.5kb upstream 0.5kb upstream 5953 true Chr14: 46140741-46146693 Glycine max
Glyma.14G196400 0.5kb upstream 0.5kb upstream 500 false Chr14: 46146194-46146693 Glycine max
Glyma.14G196400 0.5kb downstream 0.5kb downstream 5953 true Chr14: 46140241-46146193 Glycine max
Glyma.14G196400 0.5kb downstream 0.5kb downstream 500 false Chr14: 46140241-46140740 Glycine max
Glyma.14G196400 1.0kb upstream 1.0kb upstream 6453 true Chr14: 46140741-46147193 Glycine max
Glyma.14G196400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 46146194-46147193 Glycine max
Glyma.14G196400 1.0kb downstream 1.0kb downstream 6453 true Chr14: 46139741-46146193 Glycine max
Glyma.14G196400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 46139741-46140740 Glycine max
Glyma.14G196400 2.0kb upstream 2.0kb upstream 7453 true Chr14: 46140741-46148193 Glycine max
Glyma.14G196400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 46146194-46148193 Glycine max
Glyma.14G196400 2.0kb downstream 2.0kb downstream 7453 true Chr14: 46138741-46146193 Glycine max
Glyma.14G196400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 46138741-46140740 Glycine max
Glyma.14G196400 5.0kb upstream 5.0kb upstream 10453 true Chr14: 46140741-46151193 Glycine max
Glyma.14G196400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 46146194-46151193 Glycine max
Glyma.14G196400 5.0kb downstream 5.0kb downstream 10453 true Chr14: 46135741-46146193 Glycine max
Glyma.14G196400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 46135741-46140740 Glycine max
Glyma.14G196400 10.0kb upstream 10.0kb upstream 15453 true Chr14: 46140741-46156193 Glycine max
Glyma.14G196400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 46146194-46156193 Glycine max
Glyma.14G196400 10.0kb downstream 10.0kb downstream 15453 true Chr14: 46130741-46146193 Glycine max
Glyma.14G196400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 46130741-46140740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306821 5265 Fabidae View MSA
124069341 5270 Rosid View MSA
123739038 5271 Pentapetalae View MSA
122792577 5272 Eudicot View MSA
122046811 5273 Angiosperm View MSA
121347392 5274 Embryophyte View MSA
123425995 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4995 0.0 43.3636    
cufflinks 13.8471 0.0 41.546    
cufflinks 12.2365 0.0 36.9375    
cufflinks 11.992 0.0 36.3056    
cufflinks 20.8227 0.0 62.1482 High High
cufflinks 18.9361 0.0 56.0906   High
cufflinks 10.4172 0.0 32.1445   Low
cufflinks 15.1973 0.0 45.1201    
cufflinks 14.4209 0.0 43.3713    
cufflinks 4.742        
cufflinks 3.899        
cufflinks 5.374        
cufflinks 10.086     High High
cufflinks 13.097     High High
cufflinks 4.531        
cufflinks 4.457        
cufflinks 3.524       Low
cufflinks 5.315        
cufflinks 5.653        
cufflinks 3.752        
cufflinks 4.377        
cufflinks 4.297        
cufflinks 5.33        
cufflinks 4.437        
cufflinks 4.168        
cufflinks 5.615        

0 Strain