Gene : Glyma.14G183100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10966 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Genomic Order:  1831
Name:  ? Glyma.14G183100 Secondary Identifier:  ? PAC:30533892
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G183100 0.5kb upstream 0.5kb upstream 4827 true Chr14: 44681197-44686023 Glycine max
Glyma.14G183100 0.5kb upstream 0.5kb upstream 500 false Chr14: 44685524-44686023 Glycine max
Glyma.14G183100 0.5kb downstream 0.5kb downstream 4827 true Chr14: 44680697-44685523 Glycine max
Glyma.14G183100 0.5kb downstream 0.5kb downstream 500 false Chr14: 44680697-44681196 Glycine max
Glyma.14G183100 1.0kb upstream 1.0kb upstream 5327 true Chr14: 44681197-44686523 Glycine max
Glyma.14G183100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 44685524-44686523 Glycine max
Glyma.14G183100 1.0kb downstream 1.0kb downstream 5327 true Chr14: 44680197-44685523 Glycine max
Glyma.14G183100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 44680197-44681196 Glycine max
Glyma.14G183100 2.0kb upstream 2.0kb upstream 6327 true Chr14: 44681197-44687523 Glycine max
Glyma.14G183100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 44685524-44687523 Glycine max
Glyma.14G183100 2.0kb downstream 2.0kb downstream 6327 true Chr14: 44679197-44685523 Glycine max
Glyma.14G183100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 44679197-44681196 Glycine max
Glyma.14G183100 5.0kb upstream 5.0kb upstream 9327 true Chr14: 44681197-44690523 Glycine max
Glyma.14G183100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 44685524-44690523 Glycine max
Glyma.14G183100 5.0kb downstream 5.0kb downstream 9327 true Chr14: 44676197-44685523 Glycine max
Glyma.14G183100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 44676197-44681196 Glycine max
Glyma.14G183100 10.0kb upstream 10.0kb upstream 14327 true Chr14: 44681197-44695523 Glycine max
Glyma.14G183100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 44685524-44695523 Glycine max
Glyma.14G183100 10.0kb downstream 10.0kb downstream 14327 true Chr14: 44671197-44685523 Glycine max
Glyma.14G183100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 44671197-44681196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246235 5265 Fabidae Singleton cluster - no MSA
124060415 5270 Rosid View MSA
123747373 5271 Pentapetalae View MSA
122787968 5272 Eudicot View MSA
122045425 5273 Angiosperm View MSA
121349813 5274 Embryophyte View MSA
123423825 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.563 0.0 60.6435    
cufflinks 10.5967 0.0 46.993    
cufflinks 12.7054 0.0 55.5329    
cufflinks 10.6014 0.0 47.0067    
cufflinks 10.6413 0.0 47.4202    
cufflinks 15.6704 0.0 65.9306   High
cufflinks 8.69177 0.0 42.1493   Low
cufflinks 11.7498 0.0 51.723    
cufflinks 12.0888 0.0 52.4339    
cufflinks 1.008       Low
cufflinks 1.555        
cufflinks 1.673        
cufflinks 2.11       High
cufflinks 2.168       High
cufflinks 1.116       Low
cufflinks 2.049        
cufflinks 1.446        
cufflinks 1.61        
cufflinks 1.325        
cufflinks 1.583        
cufflinks 1.488        
cufflinks 1.879        
cufflinks 2.016        
cufflinks 2.342       High
cufflinks 1.785        
cufflinks 1.714        

0 Strain