Gene : Glyma.14G167200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  1672
Name:  ? Glyma.14G167200 Secondary Identifier:  ? PAC:30533744
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G167200 0.5kb upstream 0.5kb upstream 13227 true Chr14: 41352672-41365898 Glycine max
Glyma.14G167200 0.5kb upstream 0.5kb upstream 500 false Chr14: 41365399-41365898 Glycine max
Glyma.14G167200 0.5kb downstream 0.5kb downstream 13227 true Chr14: 41352172-41365398 Glycine max
Glyma.14G167200 0.5kb downstream 0.5kb downstream 500 false Chr14: 41352172-41352671 Glycine max
Glyma.14G167200 1.0kb upstream 1.0kb upstream 13727 true Chr14: 41352672-41366398 Glycine max
Glyma.14G167200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 41365399-41366398 Glycine max
Glyma.14G167200 1.0kb downstream 1.0kb downstream 13727 true Chr14: 41351672-41365398 Glycine max
Glyma.14G167200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 41351672-41352671 Glycine max
Glyma.14G167200 2.0kb upstream 2.0kb upstream 14727 true Chr14: 41352672-41367398 Glycine max
Glyma.14G167200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 41365399-41367398 Glycine max
Glyma.14G167200 2.0kb downstream 2.0kb downstream 14727 true Chr14: 41350672-41365398 Glycine max
Glyma.14G167200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 41350672-41352671 Glycine max
Glyma.14G167200 5.0kb upstream 5.0kb upstream 17727 true Chr14: 41352672-41370398 Glycine max
Glyma.14G167200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 41365399-41370398 Glycine max
Glyma.14G167200 5.0kb downstream 5.0kb downstream 17727 true Chr14: 41347672-41365398 Glycine max
Glyma.14G167200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 41347672-41352671 Glycine max
Glyma.14G167200 10.0kb upstream 10.0kb upstream 22727 true Chr14: 41352672-41375398 Glycine max
Glyma.14G167200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 41365399-41375398 Glycine max
Glyma.14G167200 10.0kb downstream 10.0kb downstream 22727 true Chr14: 41342672-41365398 Glycine max
Glyma.14G167200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 41342672-41352671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
122303516 5265 Fabidae View MSA
124068509 5270 Rosid View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51424 0.0 20.8907    
cufflinks 3.08051 0.0 13.725   Low
cufflinks 5.72229 0.0 32.9293   High
cufflinks 4.5048 0.0 25.2996    
cufflinks 2.95801 0.0 17.1378   Low
cufflinks 4.53998 0.0 25.7883    
cufflinks 4.8919 0.0 26.9877    
cufflinks 3.50567 0.0 18.6414    
cufflinks 3.71909 0.0 18.5696    
cufflinks 0.106        
cufflinks 0.177       High
cufflinks 0.215       High
cufflinks 0.116        
cufflinks 0.107        
cufflinks 0.132        
cufflinks 0.083     Low Low
cufflinks 0.102        
cufflinks 0.157        
cufflinks 0.112        
cufflinks 0.099        
cufflinks 0.152        
cufflinks 0.101        
cufflinks 0.074     Low Low
cufflinks 0.199       High
cufflinks 0.076     Low Low
cufflinks 0.119        

0 Strain