Gene : Glyma.14G220300 G. max Wm82.a2.v1

Defline:  (1 of 6) PTHR11099 - VACUOLAR SORTING PROTEIN 35 Genomic Order:  2203
Name:  ? Glyma.14G220300 Secondary Identifier:  ? PAC:30533682

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G220300 0.5kb upstream 0.5kb upstream 9251 true Chr14: 48529968-48539218 Glycine max
Glyma.14G220300 0.5kb upstream 0.5kb upstream 500 false Chr14: 48538719-48539218 Glycine max
Glyma.14G220300 0.5kb downstream 0.5kb downstream 9251 true Chr14: 48529468-48538718 Glycine max
Glyma.14G220300 0.5kb downstream 0.5kb downstream 500 false Chr14: 48529468-48529967 Glycine max
Glyma.14G220300 1.0kb upstream 1.0kb upstream 9751 true Chr14: 48529968-48539718 Glycine max
Glyma.14G220300 1.0kb upstream 1.0kb upstream 1000 false Chr14: 48538719-48539718 Glycine max
Glyma.14G220300 1.0kb downstream 1.0kb downstream 9751 true Chr14: 48528968-48538718 Glycine max
Glyma.14G220300 1.0kb downstream 1.0kb downstream 1000 false Chr14: 48528968-48529967 Glycine max
Glyma.14G220300 2.0kb upstream 2.0kb upstream 10751 true Chr14: 48529968-48540718 Glycine max
Glyma.14G220300 2.0kb upstream 2.0kb upstream 2000 false Chr14: 48538719-48540718 Glycine max
Glyma.14G220300 2.0kb downstream 2.0kb downstream 10751 true Chr14: 48527968-48538718 Glycine max
Glyma.14G220300 2.0kb downstream 2.0kb downstream 2000 false Chr14: 48527968-48529967 Glycine max
Glyma.14G220300 5.0kb upstream 5.0kb upstream 13751 true Chr14: 48529968-48543718 Glycine max
Glyma.14G220300 5.0kb upstream 5.0kb upstream 5000 false Chr14: 48538719-48543718 Glycine max
Glyma.14G220300 5.0kb downstream 5.0kb downstream 13751 true Chr14: 48524968-48538718 Glycine max
Glyma.14G220300 5.0kb downstream 5.0kb downstream 5000 false Chr14: 48524968-48529967 Glycine max
Glyma.14G220300 10.0kb upstream 10.0kb upstream 18751 true Chr14: 48529968-48548718 Glycine max
Glyma.14G220300 10.0kb upstream 10.0kb upstream 10000 false Chr14: 48538719-48548718 Glycine max
Glyma.14G220300 10.0kb downstream 10.0kb downstream 18751 true Chr14: 48519968-48538718 Glycine max
Glyma.14G220300 10.0kb downstream 10.0kb downstream 10000 false Chr14: 48519968-48529967 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312645 5265 Fabidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.95419 0.0 18.7574   Low
cufflinks 7.32511 0.0 19.7089   Low
cufflinks 9.05428 0.0 24.1889    
cufflinks 9.99356 0.0 26.6726    
cufflinks 8.20317 0.0 21.989    
cufflinks 10.9237 0.0 29.1431    
cufflinks 13.1044 0.0 35.0011   High
cufflinks 8.09732 0.0 21.7053    
cufflinks 8.8724 0.0 23.7275    
cufflinks 2.886        
cufflinks 1.84       Low
cufflinks 4.231       High
cufflinks 3.476        
cufflinks 3.654        
cufflinks 1.948       Low
cufflinks 2.721        
cufflinks 2.32        
cufflinks 5.043       High
cufflinks 3.653        
cufflinks 2.963        
cufflinks 1.957       Low
cufflinks 2.999        
cufflinks 2.67        
cufflinks 1.773       Low
cufflinks 2.706        
cufflinks 2.181        

0 Strain