Gene : Glyma.14G197100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23083//PTHR23083:SF408 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  1971
Name:  ? Glyma.14G197100 Secondary Identifier:  ? PAC:30534379
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G197100 0.5kb upstream 0.5kb upstream 5294 true Chr14: 46203934-46209227 Glycine max
Glyma.14G197100 0.5kb upstream 0.5kb upstream 500 false Chr14: 46208728-46209227 Glycine max
Glyma.14G197100 0.5kb downstream 0.5kb downstream 5294 true Chr14: 46203434-46208727 Glycine max
Glyma.14G197100 0.5kb downstream 0.5kb downstream 500 false Chr14: 46203434-46203933 Glycine max
Glyma.14G197100 1.0kb upstream 1.0kb upstream 5794 true Chr14: 46203934-46209727 Glycine max
Glyma.14G197100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 46208728-46209727 Glycine max
Glyma.14G197100 1.0kb downstream 1.0kb downstream 5794 true Chr14: 46202934-46208727 Glycine max
Glyma.14G197100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 46202934-46203933 Glycine max
Glyma.14G197100 2.0kb upstream 2.0kb upstream 6794 true Chr14: 46203934-46210727 Glycine max
Glyma.14G197100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 46208728-46210727 Glycine max
Glyma.14G197100 2.0kb downstream 2.0kb downstream 6794 true Chr14: 46201934-46208727 Glycine max
Glyma.14G197100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 46201934-46203933 Glycine max
Glyma.14G197100 5.0kb upstream 5.0kb upstream 9794 true Chr14: 46203934-46213727 Glycine max
Glyma.14G197100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 46208728-46213727 Glycine max
Glyma.14G197100 5.0kb downstream 5.0kb downstream 9794 true Chr14: 46198934-46208727 Glycine max
Glyma.14G197100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 46198934-46203933 Glycine max
Glyma.14G197100 10.0kb upstream 10.0kb upstream 14794 true Chr14: 46203934-46218727 Glycine max
Glyma.14G197100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 46208728-46218727 Glycine max
Glyma.14G197100 10.0kb downstream 10.0kb downstream 14794 true Chr14: 46193934-46208727 Glycine max
Glyma.14G197100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 46193934-46203933 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311860 5265 Fabidae View MSA
124070940 5270 Rosid View MSA
123743745 5271 Pentapetalae View MSA
122791061 5272 Eudicot View MSA
122041529 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.55287 0.0 16.1511    
cufflinks 2.3446 0.0 8.21745    
cufflinks 1.74914 0.0 7.99287    
cufflinks 2.51333 0.0 11.2526    
cufflinks 7.81655 0.0 30.2043   High
cufflinks 2.88414 0.0 9.58155    
cufflinks 1.18534 0.0 5.16224   Low
cufflinks 3.75275 0.0 15.3333    
cufflinks 4.55377 0.0 14.0278    
cufflinks 1.431        
cufflinks 0.803        
cufflinks 1.013        
cufflinks 1.837        
cufflinks 2.766       High
cufflinks 2.405       High
cufflinks 1.337        
cufflinks 0.335       Low
cufflinks 1.568        
cufflinks 1.386        
cufflinks 1.682        
cufflinks 0.666        
cufflinks 1.418        
cufflinks 0.813        
cufflinks 0.649       Low
cufflinks 1.909        
cufflinks 0.522       Low

0 Strain