Gene : Glyma.15G003900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19139:SF170 - AQUAPORIN NIP6-1 Genomic Order:  39
Name:  ? Glyma.15G003900 Secondary Identifier:  ? PAC:30498673
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G003900 0.5kb upstream 0.5kb upstream 4792 true Chr15: 355631-360422 Glycine max
Glyma.15G003900 0.5kb upstream 0.5kb upstream 500 false Chr15: 355631-356130 Glycine max
Glyma.15G003900 0.5kb downstream 0.5kb downstream 4792 true Chr15: 356131-360922 Glycine max
Glyma.15G003900 0.5kb downstream 0.5kb downstream 500 false Chr15: 360423-360922 Glycine max
Glyma.15G003900 1.0kb upstream 1.0kb upstream 5292 true Chr15: 355131-360422 Glycine max
Glyma.15G003900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 355131-356130 Glycine max
Glyma.15G003900 1.0kb downstream 1.0kb downstream 5292 true Chr15: 356131-361422 Glycine max
Glyma.15G003900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 360423-361422 Glycine max
Glyma.15G003900 2.0kb upstream 2.0kb upstream 6292 true Chr15: 354131-360422 Glycine max
Glyma.15G003900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 354131-356130 Glycine max
Glyma.15G003900 2.0kb downstream 2.0kb downstream 6292 true Chr15: 356131-362422 Glycine max
Glyma.15G003900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 360423-362422 Glycine max
Glyma.15G003900 5.0kb upstream 5.0kb upstream 9292 true Chr15: 351131-360422 Glycine max
Glyma.15G003900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 351131-356130 Glycine max
Glyma.15G003900 5.0kb downstream 5.0kb downstream 9292 true Chr15: 356131-365422 Glycine max
Glyma.15G003900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 360423-365422 Glycine max
Glyma.15G003900 10.0kb upstream 10.0kb upstream 14292 true Chr15: 346131-360422 Glycine max
Glyma.15G003900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 346131-356130 Glycine max
Glyma.15G003900 10.0kb downstream 10.0kb downstream 14292 true Chr15: 356131-370422 Glycine max
Glyma.15G003900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 360423-370422 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315351 5265 Fabidae View MSA
124065491 5270 Rosid View MSA
123738627 5271 Pentapetalae View MSA
122786860 5272 Eudicot View MSA
122045957 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.28271 0.0 25.8733   High
cufflinks 1.2042 0.0 5.61249    
cufflinks 3.24129 0.0 11.5578    
cufflinks 1.20088 0.0 6.02228    
cufflinks 3.8754 0.0 13.5698    
cufflinks 1.78924 0.0 7.19827    
cufflinks 0.0642351 0.0 0.859342 Low Low
cufflinks 8.78119 0.0 28.1057   High
cufflinks 1.82999 0.0 7.33264    
cufflinks 1.439        
cufflinks 0.193        
cufflinks 2.035       High
cufflinks 3.223       High
cufflinks 1.981       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.326        
cufflinks 0.668        
cufflinks 3.686       High
cufflinks 0.276        
cufflinks 0.125       Low
cufflinks 0.245        
cufflinks 0.301        
cufflinks 0.302        
cufflinks 0.236        
cufflinks 0.274        
cufflinks 0.506        

0 Strain