Gene : Glyma.15G006700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  67
Name:  ? Glyma.15G006700 Secondary Identifier:  ? PAC:30498876
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G006700 0.5kb upstream 0.5kb upstream 4686 true Chr15: 562809-567494 Glycine max
Glyma.15G006700 0.5kb upstream 0.5kb upstream 500 false Chr15: 566995-567494 Glycine max
Glyma.15G006700 0.5kb downstream 0.5kb downstream 4686 true Chr15: 562309-566994 Glycine max
Glyma.15G006700 0.5kb downstream 0.5kb downstream 500 false Chr15: 562309-562808 Glycine max
Glyma.15G006700 1.0kb upstream 1.0kb upstream 5186 true Chr15: 562809-567994 Glycine max
Glyma.15G006700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 566995-567994 Glycine max
Glyma.15G006700 1.0kb downstream 1.0kb downstream 5186 true Chr15: 561809-566994 Glycine max
Glyma.15G006700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 561809-562808 Glycine max
Glyma.15G006700 2.0kb upstream 2.0kb upstream 6186 true Chr15: 562809-568994 Glycine max
Glyma.15G006700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 566995-568994 Glycine max
Glyma.15G006700 2.0kb downstream 2.0kb downstream 6186 true Chr15: 560809-566994 Glycine max
Glyma.15G006700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 560809-562808 Glycine max
Glyma.15G006700 5.0kb upstream 5.0kb upstream 9186 true Chr15: 562809-571994 Glycine max
Glyma.15G006700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 566995-571994 Glycine max
Glyma.15G006700 5.0kb downstream 5.0kb downstream 9186 true Chr15: 557809-566994 Glycine max
Glyma.15G006700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 557809-562808 Glycine max
Glyma.15G006700 10.0kb upstream 10.0kb upstream 14186 true Chr15: 562809-576994 Glycine max
Glyma.15G006700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 566995-576994 Glycine max
Glyma.15G006700 10.0kb downstream 10.0kb downstream 14186 true Chr15: 552809-566994 Glycine max
Glyma.15G006700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 552809-562808 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253657 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02178 0.0 24.2206    
cufflinks 7.46828 0.0 22.7023    
cufflinks 7.40819 0.0 22.5223    
cufflinks 7.28676 0.0 22.224   Low
cufflinks 8.22834 0.0 24.7972    
cufflinks 9.52536 0.0 28.5268   High
cufflinks 10.1397 0.0 30.3117   High
cufflinks 9.40336 0.0 28.189   High
cufflinks 7.51079 0.0 22.7031    
cufflinks 4.514        
cufflinks 4.218        
cufflinks 3.71       Low
cufflinks 6.509       High
cufflinks 7.711     High High
cufflinks 3.765       Low
cufflinks 4.863        
cufflinks 3.426       Low
cufflinks 4.358        
cufflinks 5.236        
cufflinks 4.478        
cufflinks 6.82     High High
cufflinks 4.802        
cufflinks 4.992        
cufflinks 5.208        
cufflinks 4.439        
cufflinks 6.474     High High

0 Strain