Gene : Glyma.15G040500 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  405
Name:  ? Glyma.15G040500 Secondary Identifier:  ? PAC:30498724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G040500 0.5kb upstream 0.5kb upstream 3228 true Chr15: 3184945-3188172 Glycine max
Glyma.15G040500 0.5kb upstream 0.5kb upstream 500 false Chr15: 3187673-3188172 Glycine max
Glyma.15G040500 0.5kb downstream 0.5kb downstream 3228 true Chr15: 3184445-3187672 Glycine max
Glyma.15G040500 0.5kb downstream 0.5kb downstream 500 false Chr15: 3184445-3184944 Glycine max
Glyma.15G040500 1.0kb upstream 1.0kb upstream 3728 true Chr15: 3184945-3188672 Glycine max
Glyma.15G040500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3187673-3188672 Glycine max
Glyma.15G040500 1.0kb downstream 1.0kb downstream 3728 true Chr15: 3183945-3187672 Glycine max
Glyma.15G040500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3183945-3184944 Glycine max
Glyma.15G040500 2.0kb upstream 2.0kb upstream 4728 true Chr15: 3184945-3189672 Glycine max
Glyma.15G040500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3187673-3189672 Glycine max
Glyma.15G040500 2.0kb downstream 2.0kb downstream 4728 true Chr15: 3182945-3187672 Glycine max
Glyma.15G040500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3182945-3184944 Glycine max
Glyma.15G040500 5.0kb upstream 5.0kb upstream 7728 true Chr15: 3184945-3192672 Glycine max
Glyma.15G040500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3187673-3192672 Glycine max
Glyma.15G040500 5.0kb downstream 5.0kb downstream 7728 true Chr15: 3179945-3187672 Glycine max
Glyma.15G040500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3179945-3184944 Glycine max
Glyma.15G040500 10.0kb upstream 10.0kb upstream 12728 true Chr15: 3184945-3197672 Glycine max
Glyma.15G040500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3187673-3197672 Glycine max
Glyma.15G040500 10.0kb downstream 10.0kb downstream 12728 true Chr15: 3174945-3187672 Glycine max
Glyma.15G040500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3174945-3184944 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301038 5265 Fabidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99052 0.0 7.22433    
cufflinks 1.93469 0.0 7.02678    
cufflinks 1.34387 0.0 4.97547   Low
cufflinks 1.6026 0.0 5.88196    
cufflinks 1.93024 0.0 7.01895    
cufflinks 2.42107 0.0 8.66763   High
cufflinks 1.46968 0.0 5.43434   Low
cufflinks 2.36352 0.0 8.46562   High
cufflinks 2.3049 0.0 8.27705    
cufflinks 0.476        
cufflinks 0.382        
cufflinks 0.501        
cufflinks 0.848       High
cufflinks 1.048       High
cufflinks 0.524        
cufflinks 0.509        
cufflinks 0.383        
cufflinks 0.684       High
cufflinks 0.499        
cufflinks 0.371       Low
cufflinks 0.4        
cufflinks 0.47        
cufflinks 0.419        
cufflinks 0.442        
cufflinks 0.673        
cufflinks 0.436        

0 Strain