Gene : Glyma.15G041400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33431:SF2 - GB Genomic Order:  414
Name:  ? Glyma.15G041400 Secondary Identifier:  ? PAC:30495905
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G041400 0.5kb upstream 0.5kb upstream 3000 true Chr15: 3249775-3252774 Glycine max
Glyma.15G041400 0.5kb upstream 0.5kb upstream 500 false Chr15: 3249775-3250274 Glycine max
Glyma.15G041400 0.5kb downstream 0.5kb downstream 3000 true Chr15: 3250275-3253274 Glycine max
Glyma.15G041400 0.5kb downstream 0.5kb downstream 500 false Chr15: 3252775-3253274 Glycine max
Glyma.15G041400 1.0kb upstream 1.0kb upstream 3500 true Chr15: 3249275-3252774 Glycine max
Glyma.15G041400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3249275-3250274 Glycine max
Glyma.15G041400 1.0kb downstream 1.0kb downstream 3500 true Chr15: 3250275-3253774 Glycine max
Glyma.15G041400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3252775-3253774 Glycine max
Glyma.15G041400 2.0kb upstream 2.0kb upstream 4500 true Chr15: 3248275-3252774 Glycine max
Glyma.15G041400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3248275-3250274 Glycine max
Glyma.15G041400 2.0kb downstream 2.0kb downstream 4500 true Chr15: 3250275-3254774 Glycine max
Glyma.15G041400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3252775-3254774 Glycine max
Glyma.15G041400 5.0kb upstream 5.0kb upstream 7500 true Chr15: 3245275-3252774 Glycine max
Glyma.15G041400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3245275-3250274 Glycine max
Glyma.15G041400 5.0kb downstream 5.0kb downstream 7500 true Chr15: 3250275-3257774 Glycine max
Glyma.15G041400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3252775-3257774 Glycine max
Glyma.15G041400 10.0kb upstream 10.0kb upstream 12500 true Chr15: 3240275-3252774 Glycine max
Glyma.15G041400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3240275-3250274 Glycine max
Glyma.15G041400 10.0kb downstream 10.0kb downstream 12500 true Chr15: 3250275-3262774 Glycine max
Glyma.15G041400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3252775-3262774 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297007 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19008 0.0 7.44859   High
cufflinks 0.135363 0.0 0.536794 Low  
cufflinks 1.18226 0.0 4.23745    
cufflinks 0.501618 0.0 1.88492    
cufflinks 0.313033 0.0 1.20151    
cufflinks 0.0652869 0.0 0.266928 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31933 0.0 4.68362    
cufflinks 0.206621 0.0 0.806547 Low  
cufflinks 0.006     Low Low
cufflinks 0.068        
cufflinks 0.164        
cufflinks 0.221        
cufflinks 0.545       High
cufflinks 0.022     Low  
cufflinks 0.073     Low  
cufflinks 0.006     Low Low
cufflinks 0.093     Low  
cufflinks 0.103        
cufflinks 0.256        
cufflinks 0.082        
cufflinks 0.277        
cufflinks 0.109        
cufflinks 0.061        
cufflinks 0.217        
cufflinks 0.019     Low Low

0 Strain