Gene : Glyma.15G028800 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  288
Name:  ? Glyma.15G028800 Secondary Identifier:  ? PAC:30496329
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G028800 0.5kb upstream 0.5kb upstream 6060 true Chr15: 2311527-2317586 Glycine max
Glyma.15G028800 0.5kb upstream 0.5kb upstream 500 false Chr15: 2311527-2312026 Glycine max
Glyma.15G028800 0.5kb downstream 0.5kb downstream 6060 true Chr15: 2312027-2318086 Glycine max
Glyma.15G028800 0.5kb downstream 0.5kb downstream 500 false Chr15: 2317587-2318086 Glycine max
Glyma.15G028800 1.0kb upstream 1.0kb upstream 6560 true Chr15: 2311027-2317586 Glycine max
Glyma.15G028800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2311027-2312026 Glycine max
Glyma.15G028800 1.0kb downstream 1.0kb downstream 6560 true Chr15: 2312027-2318586 Glycine max
Glyma.15G028800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2317587-2318586 Glycine max
Glyma.15G028800 2.0kb upstream 2.0kb upstream 7560 true Chr15: 2310027-2317586 Glycine max
Glyma.15G028800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2310027-2312026 Glycine max
Glyma.15G028800 2.0kb downstream 2.0kb downstream 7560 true Chr15: 2312027-2319586 Glycine max
Glyma.15G028800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2317587-2319586 Glycine max
Glyma.15G028800 5.0kb upstream 5.0kb upstream 10560 true Chr15: 2307027-2317586 Glycine max
Glyma.15G028800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2307027-2312026 Glycine max
Glyma.15G028800 5.0kb downstream 5.0kb downstream 10560 true Chr15: 2312027-2322586 Glycine max
Glyma.15G028800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2317587-2322586 Glycine max
Glyma.15G028800 10.0kb upstream 10.0kb upstream 15560 true Chr15: 2302027-2317586 Glycine max
Glyma.15G028800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2302027-2312026 Glycine max
Glyma.15G028800 10.0kb downstream 10.0kb downstream 15560 true Chr15: 2312027-2327586 Glycine max
Glyma.15G028800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2317587-2327586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311736 5265 Fabidae View MSA
124064084 5270 Rosid View MSA
123740426 5271 Pentapetalae View MSA
122786912 5272 Eudicot View MSA
122043285 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.80381 0.0 12.0966   High
cufflinks 1.51207 0.0 4.71909    
cufflinks 1.37589 0.0 4.38805    
cufflinks 2.35588 0.0 8.36867    
cufflinks 2.26987 0.0 8.14588    
cufflinks 1.63928 0.0 4.98551    
cufflinks 1.27183 0.0 4.23297   Low
cufflinks 3.26495 0.0 10.6991   High
cufflinks 1.57339 0.0 6.44132    
cufflinks 1.212        
cufflinks 0.597        
cufflinks 1.254        
cufflinks 1.275        
cufflinks 1.258        
cufflinks 0.158       Low
cufflinks 1.728        
cufflinks 0.591        
cufflinks 2.521       High
cufflinks 0.986        
cufflinks 1.366        
cufflinks 0.643        
cufflinks 1.871        
cufflinks 1.524        
cufflinks 0.617        
cufflinks 1.4        
cufflinks 0.64        

0 Strain