Gene : Glyma.15G023200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  232
Name:  ? Glyma.15G023200 Secondary Identifier:  ? PAC:30499712
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G023200 0.5kb upstream 0.5kb upstream 6525 true Chr15: 1832642-1839166 Glycine max
Glyma.15G023200 0.5kb upstream 0.5kb upstream 500 false Chr15: 1832642-1833141 Glycine max
Glyma.15G023200 0.5kb downstream 0.5kb downstream 6525 true Chr15: 1833142-1839666 Glycine max
Glyma.15G023200 0.5kb downstream 0.5kb downstream 500 false Chr15: 1839167-1839666 Glycine max
Glyma.15G023200 1.0kb upstream 1.0kb upstream 7025 true Chr15: 1832142-1839166 Glycine max
Glyma.15G023200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1832142-1833141 Glycine max
Glyma.15G023200 1.0kb downstream 1.0kb downstream 7025 true Chr15: 1833142-1840166 Glycine max
Glyma.15G023200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1839167-1840166 Glycine max
Glyma.15G023200 2.0kb upstream 2.0kb upstream 8025 true Chr15: 1831142-1839166 Glycine max
Glyma.15G023200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1831142-1833141 Glycine max
Glyma.15G023200 2.0kb downstream 2.0kb downstream 8025 true Chr15: 1833142-1841166 Glycine max
Glyma.15G023200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1839167-1841166 Glycine max
Glyma.15G023200 5.0kb upstream 5.0kb upstream 11025 true Chr15: 1828142-1839166 Glycine max
Glyma.15G023200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1828142-1833141 Glycine max
Glyma.15G023200 5.0kb downstream 5.0kb downstream 11025 true Chr15: 1833142-1844166 Glycine max
Glyma.15G023200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1839167-1844166 Glycine max
Glyma.15G023200 10.0kb upstream 10.0kb upstream 16025 true Chr15: 1823142-1839166 Glycine max
Glyma.15G023200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1823142-1833141 Glycine max
Glyma.15G023200 10.0kb downstream 10.0kb downstream 16025 true Chr15: 1833142-1849166 Glycine max
Glyma.15G023200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1839167-1849166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296344 5265 Fabidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266597 0.0 1.23053   Low
cufflinks 9.89886 0.0 34.2434   High
cufflinks 2.17701 0.0 7.92324    
cufflinks 10.3114 0.0 30.9773   High
cufflinks 1.99325 0.0 7.55941    
cufflinks 7.49176 0.0 22.2909    
cufflinks 3.68806 0.0 11.9224    
cufflinks 2.77176 0.0 9.9618    
cufflinks 2.268 0.0 8.35857    
cufflinks 0.952        
cufflinks 0.063       Low
cufflinks 1.767        
cufflinks 0.281        
cufflinks 0.302        
cufflinks 1.223        
cufflinks 2.451        
cufflinks 0.098       Low
cufflinks 4.15       High
cufflinks 4.546       High
cufflinks 1.846        
cufflinks 0.204        
cufflinks 2.572        
cufflinks 2.217        
cufflinks 0.034     Low Low
cufflinks 2.198        
cufflinks 0.157        

0 Strain