Gene : Glyma.15G023500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR18896:SF79 - PHOSPHOLIPASE D EPSILON Genomic Order:  235
Name:  ? Glyma.15G023500 Secondary Identifier:  ? PAC:30496990
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G023500 0.5kb upstream 0.5kb upstream 3867 true Chr15: 1855431-1859297 Glycine max
Glyma.15G023500 0.5kb upstream 0.5kb upstream 500 false Chr15: 1855431-1855930 Glycine max
Glyma.15G023500 0.5kb downstream 0.5kb downstream 3867 true Chr15: 1855931-1859797 Glycine max
Glyma.15G023500 0.5kb downstream 0.5kb downstream 500 false Chr15: 1859298-1859797 Glycine max
Glyma.15G023500 1.0kb upstream 1.0kb upstream 4367 true Chr15: 1854931-1859297 Glycine max
Glyma.15G023500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1854931-1855930 Glycine max
Glyma.15G023500 1.0kb downstream 1.0kb downstream 4367 true Chr15: 1855931-1860297 Glycine max
Glyma.15G023500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1859298-1860297 Glycine max
Glyma.15G023500 2.0kb upstream 2.0kb upstream 5367 true Chr15: 1853931-1859297 Glycine max
Glyma.15G023500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1853931-1855930 Glycine max
Glyma.15G023500 2.0kb downstream 2.0kb downstream 5367 true Chr15: 1855931-1861297 Glycine max
Glyma.15G023500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1859298-1861297 Glycine max
Glyma.15G023500 5.0kb upstream 5.0kb upstream 8367 true Chr15: 1850931-1859297 Glycine max
Glyma.15G023500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1850931-1855930 Glycine max
Glyma.15G023500 5.0kb downstream 5.0kb downstream 8367 true Chr15: 1855931-1864297 Glycine max
Glyma.15G023500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1859298-1864297 Glycine max
Glyma.15G023500 10.0kb upstream 10.0kb upstream 13367 true Chr15: 1845931-1859297 Glycine max
Glyma.15G023500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1845931-1855930 Glycine max
Glyma.15G023500 10.0kb downstream 10.0kb downstream 13367 true Chr15: 1855931-1869297 Glycine max
Glyma.15G023500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1859298-1869297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304539 5265 Fabidae View MSA
124061086 5270 Rosid View MSA
123739430 5271 Pentapetalae View MSA
122786785 5272 Eudicot View MSA
122045742 5273 Angiosperm View MSA
121310493 5274 Embryophyte View MSA
123347963 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.283818 0.0 1.05255    
cufflinks 0.656615 0.0 2.30879    
cufflinks 5.08147 0.0 13.9273   High
cufflinks 0.12419 0.0 0.477827 Low  
cufflinks 0.314046 0.0 1.1593    
cufflinks 0.209996 0.0 0.790239 Low  
cufflinks 0.0588418 0.0 0.233226 Low Low
cufflinks 0.26946 0.0 1.00104    
cufflinks 1.02353 0.0 3.44104    
cufflinks 0.904        
cufflinks 0.167        
cufflinks 7.88     High High
cufflinks 2.201        
cufflinks 0.14        
cufflinks 0.005     Low Low
cufflinks 1.179        
cufflinks 0.285        
cufflinks 0.857        
cufflinks 1.019        
cufflinks 0.963        
cufflinks 0.311        
cufflinks 1.451        
cufflinks 1.87        
cufflinks 0.191        
cufflinks 1.111        
cufflinks 0.652        

0 Strain