Gene : Glyma.15G057700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11002//PTHR11002:SF12 - CARBONIC ANHYDRASE Genomic Order:  577
Name:  ? Glyma.15G057700 Secondary Identifier:  ? PAC:30499928
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYANCAT-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax PWYQT-4429 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G057700 0.5kb upstream 0.5kb upstream 4516 true Chr15: 4440424-4444939 Glycine max
Glyma.15G057700 0.5kb upstream 0.5kb upstream 500 false Chr15: 4444440-4444939 Glycine max
Glyma.15G057700 0.5kb downstream 0.5kb downstream 4516 true Chr15: 4439924-4444439 Glycine max
Glyma.15G057700 0.5kb downstream 0.5kb downstream 500 false Chr15: 4439924-4440423 Glycine max
Glyma.15G057700 1.0kb upstream 1.0kb upstream 5016 true Chr15: 4440424-4445439 Glycine max
Glyma.15G057700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4444440-4445439 Glycine max
Glyma.15G057700 1.0kb downstream 1.0kb downstream 5016 true Chr15: 4439424-4444439 Glycine max
Glyma.15G057700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4439424-4440423 Glycine max
Glyma.15G057700 2.0kb upstream 2.0kb upstream 6016 true Chr15: 4440424-4446439 Glycine max
Glyma.15G057700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4444440-4446439 Glycine max
Glyma.15G057700 2.0kb downstream 2.0kb downstream 6016 true Chr15: 4438424-4444439 Glycine max
Glyma.15G057700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4438424-4440423 Glycine max
Glyma.15G057700 5.0kb upstream 5.0kb upstream 9016 true Chr15: 4440424-4449439 Glycine max
Glyma.15G057700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4444440-4449439 Glycine max
Glyma.15G057700 5.0kb downstream 5.0kb downstream 9016 true Chr15: 4435424-4444439 Glycine max
Glyma.15G057700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4435424-4440423 Glycine max
Glyma.15G057700 10.0kb upstream 10.0kb upstream 14016 true Chr15: 4440424-4454439 Glycine max
Glyma.15G057700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4444440-4454439 Glycine max
Glyma.15G057700 10.0kb downstream 10.0kb downstream 14016 true Chr15: 4430424-4444439 Glycine max
Glyma.15G057700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4430424-4440423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306055 5265 Fabidae View MSA
124068244 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.61455 0.0 36.3891    
cufflinks 9.47202 0.0 37.3892    
cufflinks 5.60327 0.0 20.9398    
cufflinks 14.362 0.0 50.5207   High
cufflinks 4.40757 0.0 21.9369    
cufflinks 6.96924 0.0 29.8814    
cufflinks 1.1679 0.0 6.71613   Low
cufflinks 9.19961 0.0 36.4889    
cufflinks 2.16414 0.0 13.1391   Low
cufflinks 1.525        
cufflinks 0.031     Low Low
cufflinks 1.154        
cufflinks 0.739        
cufflinks 0.508        
cufflinks 0.018     Low Low
cufflinks 1.115        
cufflinks 0.247        
cufflinks 1.385        
cufflinks 1.176        
cufflinks 0.81        
cufflinks 0.071        
cufflinks 1.166        
cufflinks 2.47       High
cufflinks 0.008     Low Low
cufflinks 1.113        
cufflinks 0.144        

0 Strain