Gene : Glyma.15G048100 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.4.22.49 - Separase / Separin Genomic Order:  481
Name:  ? Glyma.15G048100 Secondary Identifier:  ? PAC:30499364
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G048100 0.5kb upstream 0.5kb upstream 15134 true Chr15: 3795509-3810642 Glycine max
Glyma.15G048100 0.5kb upstream 0.5kb upstream 500 false Chr15: 3810143-3810642 Glycine max
Glyma.15G048100 0.5kb downstream 0.5kb downstream 15134 true Chr15: 3795009-3810142 Glycine max
Glyma.15G048100 0.5kb downstream 0.5kb downstream 500 false Chr15: 3795009-3795508 Glycine max
Glyma.15G048100 1.0kb upstream 1.0kb upstream 15634 true Chr15: 3795509-3811142 Glycine max
Glyma.15G048100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3810143-3811142 Glycine max
Glyma.15G048100 1.0kb downstream 1.0kb downstream 15634 true Chr15: 3794509-3810142 Glycine max
Glyma.15G048100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3794509-3795508 Glycine max
Glyma.15G048100 2.0kb upstream 2.0kb upstream 16634 true Chr15: 3795509-3812142 Glycine max
Glyma.15G048100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3810143-3812142 Glycine max
Glyma.15G048100 2.0kb downstream 2.0kb downstream 16634 true Chr15: 3793509-3810142 Glycine max
Glyma.15G048100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3793509-3795508 Glycine max
Glyma.15G048100 5.0kb upstream 5.0kb upstream 19634 true Chr15: 3795509-3815142 Glycine max
Glyma.15G048100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3810143-3815142 Glycine max
Glyma.15G048100 5.0kb downstream 5.0kb downstream 19634 true Chr15: 3790509-3810142 Glycine max
Glyma.15G048100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3790509-3795508 Glycine max
Glyma.15G048100 10.0kb upstream 10.0kb upstream 24634 true Chr15: 3795509-3820142 Glycine max
Glyma.15G048100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3810143-3820142 Glycine max
Glyma.15G048100 10.0kb downstream 10.0kb downstream 24634 true Chr15: 3785509-3810142 Glycine max
Glyma.15G048100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3785509-3795508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300266 5265 Fabidae View MSA
124073860 5270 Rosid View MSA
123739769 5271 Pentapetalae View MSA
122789047 5272 Eudicot View MSA
122049193 5273 Angiosperm View MSA
121346521 5274 Embryophyte View MSA
123380397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118447 0.0 0.741937 Low Low
cufflinks 1.71945 0.0 6.53338   High
cufflinks 0.397049 0.0 1.486    
cufflinks 0.533351 0.0 1.91454    
cufflinks 1.44227 0.0 4.95161   High
cufflinks 0.414661 0.0 2.07149    
cufflinks 0.673421 0.0 2.24759    
cufflinks 0.629625 0.0 2.13964    
cufflinks 0.862616 0.0 2.62997    
cufflinks 0.276        
cufflinks 0.069       Low
cufflinks 0.24        
cufflinks 0.566        
cufflinks 0.763       High
cufflinks 0.098       Low
cufflinks 0.482        
cufflinks 0.101       Low
cufflinks 0.204        
cufflinks 0.923       High
cufflinks 0.39        
cufflinks 0.096       Low
cufflinks 0.466        
cufflinks 0.727       High
cufflinks 0.152        
cufflinks 0.395        
cufflinks 0.135        

0 Strain