Gene : Glyma.15G050900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22951//PTHR22951:SF12 - CLATHRIN ASSEMBLY PROTEIN Genomic Order:  509
Name:  ? Glyma.15G050900 Secondary Identifier:  ? PAC:30495915
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G050900 0.5kb upstream 0.5kb upstream 3728 true Chr15: 4002579-4006306 Glycine max
Glyma.15G050900 0.5kb upstream 0.5kb upstream 500 false Chr15: 4002579-4003078 Glycine max
Glyma.15G050900 0.5kb downstream 0.5kb downstream 3728 true Chr15: 4003079-4006806 Glycine max
Glyma.15G050900 0.5kb downstream 0.5kb downstream 500 false Chr15: 4006307-4006806 Glycine max
Glyma.15G050900 1.0kb upstream 1.0kb upstream 4228 true Chr15: 4002079-4006306 Glycine max
Glyma.15G050900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4002079-4003078 Glycine max
Glyma.15G050900 1.0kb downstream 1.0kb downstream 4228 true Chr15: 4003079-4007306 Glycine max
Glyma.15G050900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4006307-4007306 Glycine max
Glyma.15G050900 2.0kb upstream 2.0kb upstream 5228 true Chr15: 4001079-4006306 Glycine max
Glyma.15G050900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4001079-4003078 Glycine max
Glyma.15G050900 2.0kb downstream 2.0kb downstream 5228 true Chr15: 4003079-4008306 Glycine max
Glyma.15G050900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4006307-4008306 Glycine max
Glyma.15G050900 5.0kb upstream 5.0kb upstream 8228 true Chr15: 3998079-4006306 Glycine max
Glyma.15G050900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3998079-4003078 Glycine max
Glyma.15G050900 5.0kb downstream 5.0kb downstream 8228 true Chr15: 4003079-4011306 Glycine max
Glyma.15G050900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4006307-4011306 Glycine max
Glyma.15G050900 10.0kb upstream 10.0kb upstream 13228 true Chr15: 3993079-4006306 Glycine max
Glyma.15G050900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3993079-4003078 Glycine max
Glyma.15G050900 10.0kb downstream 10.0kb downstream 13228 true Chr15: 4003079-4016306 Glycine max
Glyma.15G050900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4006307-4016306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307367 5265 Fabidae View MSA
124066934 5270 Rosid View MSA
123739341 5271 Pentapetalae View MSA
122788140 5272 Eudicot View MSA
122050548 5273 Angiosperm View MSA
123428889 5275 Viridiplantae View MSA
121311984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.9639 0.0 42.826   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0205699 0.0 0.0860819 Low  
cufflinks 0.120446 0.0 0.465994 Low  
cufflinks 0.0211935 0.0 0.0884956 Low  
cufflinks 0.0703006 0.0 0.277408 Low  
cufflinks 0.0727032 0.0 0.286817 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 2.845       High
cufflinks 0.069     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 5.081       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  

0 Strain