Gene : Glyma.15G087100 G. max Wm82.a2.v1
Defline:  (1 of 19) PTHR12210 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED Genomic Order:  871
Name:  ? Glyma.15G087100 Secondary Identifier:  ? PAC:30496514
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G087100 0.5kb upstream 0.5kb upstream 1367 true Chr15: 6671215-6672581 Glycine max
Glyma.15G087100 0.5kb upstream 0.5kb upstream 500 false Chr15: 6672082-6672581 Glycine max
Glyma.15G087100 0.5kb downstream 0.5kb downstream 1367 true Chr15: 6670715-6672081 Glycine max
Glyma.15G087100 0.5kb downstream 0.5kb downstream 500 false Chr15: 6670715-6671214 Glycine max
Glyma.15G087100 1.0kb upstream 1.0kb upstream 1867 true Chr15: 6671215-6673081 Glycine max
Glyma.15G087100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6672082-6673081 Glycine max
Glyma.15G087100 1.0kb downstream 1.0kb downstream 1867 true Chr15: 6670215-6672081 Glycine max
Glyma.15G087100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6670215-6671214 Glycine max
Glyma.15G087100 2.0kb upstream 2.0kb upstream 2867 true Chr15: 6671215-6674081 Glycine max
Glyma.15G087100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6672082-6674081 Glycine max
Glyma.15G087100 2.0kb downstream 2.0kb downstream 2867 true Chr15: 6669215-6672081 Glycine max
Glyma.15G087100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6669215-6671214 Glycine max
Glyma.15G087100 5.0kb upstream 5.0kb upstream 5867 true Chr15: 6671215-6677081 Glycine max
Glyma.15G087100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6672082-6677081 Glycine max
Glyma.15G087100 5.0kb downstream 5.0kb downstream 5867 true Chr15: 6666215-6672081 Glycine max
Glyma.15G087100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6666215-6671214 Glycine max
Glyma.15G087100 10.0kb upstream 10.0kb upstream 10867 true Chr15: 6671215-6682081 Glycine max
Glyma.15G087100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6672082-6682081 Glycine max
Glyma.15G087100 10.0kb downstream 10.0kb downstream 10867 true Chr15: 6661215-6672081 Glycine max
Glyma.15G087100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6661215-6671214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303996 5265 Fabidae View MSA
124050168 5270 Rosid View MSA
123737409 5271 Pentapetalae View MSA
122787896 5272 Eudicot View MSA
122044023 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121350808 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153297 0.0 0.618198 Low Low
cufflinks 6.13753 0.0 19.7395   High
cufflinks 0.448191 0.0 1.74924   Low
cufflinks 2.26443 0.0 8.10522    
cufflinks 3.13743 0.0 10.7803    
cufflinks 1.41085 0.0 5.17628    
cufflinks 2.63081 0.0 9.2418    
cufflinks 3.0185 0.0 10.5376    
cufflinks 2.74063 0.0 9.61419    
cufflinks 2.44        
cufflinks 0.177       Low
cufflinks 1.176        
cufflinks 2.648        
cufflinks 3.247        
cufflinks 0.847        
cufflinks 4.354        
cufflinks 0.34        
cufflinks 0.998        
cufflinks 6.357       High
cufflinks 3.954        
cufflinks 0.295       Low
cufflinks 4.338        
cufflinks 5.189       High
cufflinks 0.064       Low
cufflinks 2.993        
cufflinks 0.489        

0 Strain