Gene : Glyma.15G092000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13763:SF1 - PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Genomic Order:  920
Name:  ? Glyma.15G092000 Secondary Identifier:  ? PAC:30497481
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G092000 0.5kb upstream 0.5kb upstream 9463 true Chr15: 7085112-7094574 Glycine max
Glyma.15G092000 0.5kb upstream 0.5kb upstream 500 false Chr15: 7085112-7085611 Glycine max
Glyma.15G092000 0.5kb downstream 0.5kb downstream 9463 true Chr15: 7085612-7095074 Glycine max
Glyma.15G092000 0.5kb downstream 0.5kb downstream 500 false Chr15: 7094575-7095074 Glycine max
Glyma.15G092000 1.0kb upstream 1.0kb upstream 9963 true Chr15: 7084612-7094574 Glycine max
Glyma.15G092000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 7084612-7085611 Glycine max
Glyma.15G092000 1.0kb downstream 1.0kb downstream 9963 true Chr15: 7085612-7095574 Glycine max
Glyma.15G092000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 7094575-7095574 Glycine max
Glyma.15G092000 2.0kb upstream 2.0kb upstream 10963 true Chr15: 7083612-7094574 Glycine max
Glyma.15G092000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 7083612-7085611 Glycine max
Glyma.15G092000 2.0kb downstream 2.0kb downstream 10963 true Chr15: 7085612-7096574 Glycine max
Glyma.15G092000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 7094575-7096574 Glycine max
Glyma.15G092000 5.0kb upstream 5.0kb upstream 13963 true Chr15: 7080612-7094574 Glycine max
Glyma.15G092000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 7080612-7085611 Glycine max
Glyma.15G092000 5.0kb downstream 5.0kb downstream 13963 true Chr15: 7085612-7099574 Glycine max
Glyma.15G092000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 7094575-7099574 Glycine max
Glyma.15G092000 10.0kb upstream 10.0kb upstream 18963 true Chr15: 7075612-7094574 Glycine max
Glyma.15G092000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 7075612-7085611 Glycine max
Glyma.15G092000 10.0kb downstream 10.0kb downstream 18963 true Chr15: 7085612-7104574 Glycine max
Glyma.15G092000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 7094575-7104574 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312492 5265 Fabidae View MSA
124069553 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.133564 0.0 0.653728 Low Low
cufflinks 1.83478 0.0 6.45925   High
cufflinks 0.244297 0.0 1.4461   Low
cufflinks 0.568769 0.0 2.84513    
cufflinks 1.30727 0.0 5.10916    
cufflinks 0.689632 0.0 3.27279    
cufflinks 0.697449 0.0 3.31712    
cufflinks 0.432155 0.0 1.76209    
cufflinks 1.53832 0.0 5.67759   High
cufflinks 0.162        
cufflinks 0.123       Low
cufflinks 0.33        
cufflinks 0.771       High
cufflinks 0.848       High
cufflinks 0.168        
cufflinks 0.531        
cufflinks 0.127       Low
cufflinks 0.217        
cufflinks 1.014       High
cufflinks 0.296        
cufflinks 0.167        
cufflinks 0.391        
cufflinks 0.952       High
cufflinks 0.214        
cufflinks 0.389        
cufflinks 0.21        

0 Strain