Gene : Glyma.15G092500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED Genomic Order:  925
Name:  ? Glyma.15G092500 Secondary Identifier:  ? PAC:30497305
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G092500 0.5kb upstream 0.5kb upstream 11292 true Chr15: 7155948-7167239 Glycine max
Glyma.15G092500 0.5kb upstream 0.5kb upstream 500 false Chr15: 7155948-7156447 Glycine max
Glyma.15G092500 0.5kb downstream 0.5kb downstream 11292 true Chr15: 7156448-7167739 Glycine max
Glyma.15G092500 0.5kb downstream 0.5kb downstream 500 false Chr15: 7167240-7167739 Glycine max
Glyma.15G092500 1.0kb upstream 1.0kb upstream 11792 true Chr15: 7155448-7167239 Glycine max
Glyma.15G092500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 7155448-7156447 Glycine max
Glyma.15G092500 1.0kb downstream 1.0kb downstream 11792 true Chr15: 7156448-7168239 Glycine max
Glyma.15G092500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 7167240-7168239 Glycine max
Glyma.15G092500 2.0kb upstream 2.0kb upstream 12792 true Chr15: 7154448-7167239 Glycine max
Glyma.15G092500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 7154448-7156447 Glycine max
Glyma.15G092500 2.0kb downstream 2.0kb downstream 12792 true Chr15: 7156448-7169239 Glycine max
Glyma.15G092500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 7167240-7169239 Glycine max
Glyma.15G092500 5.0kb upstream 5.0kb upstream 15792 true Chr15: 7151448-7167239 Glycine max
Glyma.15G092500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 7151448-7156447 Glycine max
Glyma.15G092500 5.0kb downstream 5.0kb downstream 15792 true Chr15: 7156448-7172239 Glycine max
Glyma.15G092500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 7167240-7172239 Glycine max
Glyma.15G092500 10.0kb upstream 10.0kb upstream 20792 true Chr15: 7146448-7167239 Glycine max
Glyma.15G092500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 7146448-7156447 Glycine max
Glyma.15G092500 10.0kb downstream 10.0kb downstream 20792 true Chr15: 7156448-7177239 Glycine max
Glyma.15G092500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 7167240-7177239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307262 5265 Fabidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5319 0.0 41.8149   High
cufflinks 12.7786 0.0 34.1782    
cufflinks 5.49949 0.0 14.9446    
cufflinks 12.9398 0.0 34.6473    
cufflinks 1.76628 0.0 5.46076   Low
cufflinks 1.76038 0.0 5.45291   Low
cufflinks 8.87847 0.0 23.7048    
cufflinks 2.73285 0.0 7.91222    
cufflinks 6.30873 0.0 17.0271    
cufflinks 0.89        
cufflinks 0.679       Low
cufflinks 2.308        
cufflinks 1.742        
cufflinks 0.209       Low
cufflinks 2.118        
cufflinks 8.903     High High
cufflinks 1.634        
cufflinks 4.443        
cufflinks 6.574        
cufflinks 10.304     High High
cufflinks 0.745        
cufflinks 10.582     High High
cufflinks 10.256     High High
cufflinks 0.943        
cufflinks 9.07     High High
cufflinks 0.686       Low

0 Strain