Gene : Glyma.15G076800 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  768
Name:  ? Glyma.15G076800 Secondary Identifier:  ? PAC:30497746
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G076800 0.5kb upstream 0.5kb upstream 7291 true Chr15: 5901589-5908879 Glycine max
Glyma.15G076800 0.5kb upstream 0.5kb upstream 500 false Chr15: 5908380-5908879 Glycine max
Glyma.15G076800 0.5kb downstream 0.5kb downstream 7291 true Chr15: 5901089-5908379 Glycine max
Glyma.15G076800 0.5kb downstream 0.5kb downstream 500 false Chr15: 5901089-5901588 Glycine max
Glyma.15G076800 1.0kb upstream 1.0kb upstream 7791 true Chr15: 5901589-5909379 Glycine max
Glyma.15G076800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5908380-5909379 Glycine max
Glyma.15G076800 1.0kb downstream 1.0kb downstream 7791 true Chr15: 5900589-5908379 Glycine max
Glyma.15G076800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5900589-5901588 Glycine max
Glyma.15G076800 2.0kb upstream 2.0kb upstream 8791 true Chr15: 5901589-5910379 Glycine max
Glyma.15G076800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5908380-5910379 Glycine max
Glyma.15G076800 2.0kb downstream 2.0kb downstream 8791 true Chr15: 5899589-5908379 Glycine max
Glyma.15G076800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5899589-5901588 Glycine max
Glyma.15G076800 5.0kb upstream 5.0kb upstream 11791 true Chr15: 5901589-5913379 Glycine max
Glyma.15G076800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5908380-5913379 Glycine max
Glyma.15G076800 5.0kb downstream 5.0kb downstream 11791 true Chr15: 5896589-5908379 Glycine max
Glyma.15G076800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5896589-5901588 Glycine max
Glyma.15G076800 10.0kb upstream 10.0kb upstream 16791 true Chr15: 5901589-5918379 Glycine max
Glyma.15G076800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5908380-5918379 Glycine max
Glyma.15G076800 10.0kb downstream 10.0kb downstream 16791 true Chr15: 5891589-5908379 Glycine max
Glyma.15G076800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5891589-5901588 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304638 5265 Fabidae View MSA
124062479 5270 Rosid View MSA
123743677 5271 Pentapetalae View MSA
122786281 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49497 0.0 4.58713    
cufflinks 2.59781 0.0 7.42208    
cufflinks 2.05518 0.0 6.00161    
cufflinks 2.39229 0.0 6.87479    
cufflinks 1.51454 0.0 4.64635    
cufflinks 1.20709 0.0 3.83018   Low
cufflinks 3.89657 0.0 10.7083   High
cufflinks 1.43425 0.0 4.42275    
cufflinks 1.77383 0.0 5.32896    
cufflinks 1.118       Low
cufflinks 1.608        
cufflinks 2.197       High
cufflinks 1.048       Low
cufflinks 1.29        
cufflinks 2.175       High
cufflinks 1.735        
cufflinks 0.869       Low
cufflinks 2.203       High
cufflinks 2.293       High
cufflinks 2.009        
cufflinks 1.484        
cufflinks 1.796        
cufflinks 1.634        
cufflinks 1.505        
cufflinks 1.888        
cufflinks 0.992       Low

0 Strain