Gene : Glyma.15G078600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10168:SF69 - GLUTAREDOXIN-C9 Genomic Order:  786
Name:  ? Glyma.15G078600 Secondary Identifier:  ? PAC:30495717
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G078600 0.5kb upstream 0.5kb upstream 1999 true Chr15: 6035650-6037648 Glycine max
Glyma.15G078600 0.5kb upstream 0.5kb upstream 500 false Chr15: 6037149-6037648 Glycine max
Glyma.15G078600 0.5kb downstream 0.5kb downstream 1999 true Chr15: 6035150-6037148 Glycine max
Glyma.15G078600 0.5kb downstream 0.5kb downstream 500 false Chr15: 6035150-6035649 Glycine max
Glyma.15G078600 1.0kb upstream 1.0kb upstream 2499 true Chr15: 6035650-6038148 Glycine max
Glyma.15G078600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6037149-6038148 Glycine max
Glyma.15G078600 1.0kb downstream 1.0kb downstream 2499 true Chr15: 6034650-6037148 Glycine max
Glyma.15G078600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6034650-6035649 Glycine max
Glyma.15G078600 2.0kb upstream 2.0kb upstream 3499 true Chr15: 6035650-6039148 Glycine max
Glyma.15G078600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6037149-6039148 Glycine max
Glyma.15G078600 2.0kb downstream 2.0kb downstream 3499 true Chr15: 6033650-6037148 Glycine max
Glyma.15G078600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6033650-6035649 Glycine max
Glyma.15G078600 5.0kb upstream 5.0kb upstream 6499 true Chr15: 6035650-6042148 Glycine max
Glyma.15G078600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6037149-6042148 Glycine max
Glyma.15G078600 5.0kb downstream 5.0kb downstream 6499 true Chr15: 6030650-6037148 Glycine max
Glyma.15G078600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6030650-6035649 Glycine max
Glyma.15G078600 10.0kb upstream 10.0kb upstream 11499 true Chr15: 6035650-6047148 Glycine max
Glyma.15G078600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6037149-6047148 Glycine max
Glyma.15G078600 10.0kb downstream 10.0kb downstream 11499 true Chr15: 6025650-6037148 Glycine max
Glyma.15G078600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6025650-6035649 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312672 5265 Fabidae View MSA
124069898 5270 Rosid View MSA
123744216 5271 Pentapetalae View MSA
122796120 5272 Eudicot View MSA
122048311 5273 Angiosperm View MSA
121310926 5274 Embryophyte View MSA
123348298 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.50941 0.0 11.2647    
cufflinks 2.61352 0.0 8.7409    
cufflinks 6.33153 0.0 18.7437    
cufflinks 5.99054 0.0 17.8523    
cufflinks 8.40947 0.0 23.9223    
cufflinks 24.7218 0.0 65.967 High High
cufflinks 0.568612 0.0 2.12796   Low
cufflinks 2.28197 0.0 7.75418    
cufflinks 2.08852 0.0 7.14959    
cufflinks 41.835     High High
cufflinks 30.136     High  
cufflinks 16.227     High  
cufflinks 10.226     High  
cufflinks 2.854       Low
cufflinks 9.757     High  
cufflinks 13.752     High  
cufflinks 64.351     High High
cufflinks 19.453     High  
cufflinks 9.268     High  
cufflinks 8.319     High  
cufflinks 20.354     High  
cufflinks 7.693     High  
cufflinks 22.357     High  
cufflinks 18.663     High  
cufflinks 11.235     High  
cufflinks 54.977     High High

0 Strain