Gene : Glyma.15G085900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Genomic Order:  859
Name:  ? Glyma.15G085900 Secondary Identifier:  ? PAC:30499631
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G085900 0.5kb upstream 0.5kb upstream 7923 true Chr15: 6593505-6601427 Glycine max
Glyma.15G085900 0.5kb upstream 0.5kb upstream 500 false Chr15: 6593505-6594004 Glycine max
Glyma.15G085900 0.5kb downstream 0.5kb downstream 7923 true Chr15: 6594005-6601927 Glycine max
Glyma.15G085900 0.5kb downstream 0.5kb downstream 500 false Chr15: 6601428-6601927 Glycine max
Glyma.15G085900 1.0kb upstream 1.0kb upstream 8423 true Chr15: 6593005-6601427 Glycine max
Glyma.15G085900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6593005-6594004 Glycine max
Glyma.15G085900 1.0kb downstream 1.0kb downstream 8423 true Chr15: 6594005-6602427 Glycine max
Glyma.15G085900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6601428-6602427 Glycine max
Glyma.15G085900 2.0kb upstream 2.0kb upstream 9423 true Chr15: 6592005-6601427 Glycine max
Glyma.15G085900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6592005-6594004 Glycine max
Glyma.15G085900 2.0kb downstream 2.0kb downstream 9423 true Chr15: 6594005-6603427 Glycine max
Glyma.15G085900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6601428-6603427 Glycine max
Glyma.15G085900 5.0kb upstream 5.0kb upstream 12423 true Chr15: 6589005-6601427 Glycine max
Glyma.15G085900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6589005-6594004 Glycine max
Glyma.15G085900 5.0kb downstream 5.0kb downstream 12423 true Chr15: 6594005-6606427 Glycine max
Glyma.15G085900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6601428-6606427 Glycine max
Glyma.15G085900 10.0kb upstream 10.0kb upstream 17423 true Chr15: 6584005-6601427 Glycine max
Glyma.15G085900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6584005-6594004 Glycine max
Glyma.15G085900 10.0kb downstream 10.0kb downstream 17423 true Chr15: 6594005-6611427 Glycine max
Glyma.15G085900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6601428-6611427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040922 5273 Angiosperm View MSA
122298982 5265 Fabidae View MSA
124064207 5270 Rosid View MSA
123751329 5271 Pentapetalae View MSA
122792829 5272 Eudicot View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76864 0.0 10.1993    
cufflinks 7.17956 0.0 24.9568   High
cufflinks 3.20022 0.0 11.5408    
cufflinks 2.63613 0.0 9.93325    
cufflinks 5.81305 0.0 19.9198    
cufflinks 2.24341 0.0 7.41607   Low
cufflinks 6.04657 0.0 20.876    
cufflinks 5.46494 0.0 18.7294    
cufflinks 2.86693 0.0 9.04858    
cufflinks 1.693        
cufflinks 0.108       Low
cufflinks 2.265        
cufflinks 2.328        
cufflinks 3.066        
cufflinks 0.378        
cufflinks 2.79        
cufflinks 0.728        
cufflinks 3.161        
cufflinks 4.715       High
cufflinks 2.852        
cufflinks 0.192       Low
cufflinks 3.546        
cufflinks 3.938        
cufflinks 0.235       Low
cufflinks 2.684        
cufflinks 0.406        

0 Strain