Gene : Glyma.15G070000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  700
Name:  ? Glyma.15G070000 Secondary Identifier:  ? PAC:30496383
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G070000 0.5kb upstream 0.5kb upstream 5611 true Chr15: 5346678-5352288 Glycine max
Glyma.15G070000 0.5kb upstream 0.5kb upstream 500 false Chr15: 5351789-5352288 Glycine max
Glyma.15G070000 0.5kb downstream 0.5kb downstream 5611 true Chr15: 5346178-5351788 Glycine max
Glyma.15G070000 0.5kb downstream 0.5kb downstream 500 false Chr15: 5346178-5346677 Glycine max
Glyma.15G070000 1.0kb upstream 1.0kb upstream 6111 true Chr15: 5346678-5352788 Glycine max
Glyma.15G070000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5351789-5352788 Glycine max
Glyma.15G070000 1.0kb downstream 1.0kb downstream 6111 true Chr15: 5345678-5351788 Glycine max
Glyma.15G070000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5345678-5346677 Glycine max
Glyma.15G070000 2.0kb upstream 2.0kb upstream 7111 true Chr15: 5346678-5353788 Glycine max
Glyma.15G070000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5351789-5353788 Glycine max
Glyma.15G070000 2.0kb downstream 2.0kb downstream 7111 true Chr15: 5344678-5351788 Glycine max
Glyma.15G070000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5344678-5346677 Glycine max
Glyma.15G070000 5.0kb upstream 5.0kb upstream 10111 true Chr15: 5346678-5356788 Glycine max
Glyma.15G070000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5351789-5356788 Glycine max
Glyma.15G070000 5.0kb downstream 5.0kb downstream 10111 true Chr15: 5341678-5351788 Glycine max
Glyma.15G070000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5341678-5346677 Glycine max
Glyma.15G070000 10.0kb upstream 10.0kb upstream 15111 true Chr15: 5346678-5361788 Glycine max
Glyma.15G070000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5351789-5361788 Glycine max
Glyma.15G070000 10.0kb downstream 10.0kb downstream 15111 true Chr15: 5336678-5351788 Glycine max
Glyma.15G070000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5336678-5346677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314976 5265 Fabidae View MSA
124050830 5270 Rosid View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0998 0.0 54.3056    
cufflinks 18.0137 0.0 74.3367    
cufflinks 17.0701 0.0 70.6334    
cufflinks 15.1598 0.0 63.0845    
cufflinks 18.1975 0.0 75.3842    
cufflinks 30.0773 0.0 126.733 High High
cufflinks 12.6639 0.0 49.371   Low
cufflinks 17.196 0.0 70.9976    
cufflinks 18.2663 0.0 69.0037    
cufflinks 1.543        
cufflinks 1.046       Low
cufflinks 1.27        
cufflinks 2.192       High
cufflinks 2.416       High
cufflinks 1.022       Low
cufflinks 2.073       High
cufflinks 0.867       Low
cufflinks 1.393        
cufflinks 1.679        
cufflinks 1.864        
cufflinks 1.234        
cufflinks 1.916        
cufflinks 1.716        
cufflinks 1.152        
cufflinks 1.936        
cufflinks 1.345        

0 Strain