Gene : Glyma.15G073700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12313//PTHR12313:SF6 - RNF5 Genomic Order:  737
Name:  ? Glyma.15G073700 Secondary Identifier:  ? PAC:30499640
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G073700 0.5kb upstream 0.5kb upstream 2843 true Chr15: 5638401-5641243 Glycine max
Glyma.15G073700 0.5kb upstream 0.5kb upstream 500 false Chr15: 5640744-5641243 Glycine max
Glyma.15G073700 0.5kb downstream 0.5kb downstream 2843 true Chr15: 5637901-5640743 Glycine max
Glyma.15G073700 0.5kb downstream 0.5kb downstream 500 false Chr15: 5637901-5638400 Glycine max
Glyma.15G073700 1.0kb upstream 1.0kb upstream 3343 true Chr15: 5638401-5641743 Glycine max
Glyma.15G073700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5640744-5641743 Glycine max
Glyma.15G073700 1.0kb downstream 1.0kb downstream 3343 true Chr15: 5637401-5640743 Glycine max
Glyma.15G073700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5637401-5638400 Glycine max
Glyma.15G073700 2.0kb upstream 2.0kb upstream 4343 true Chr15: 5638401-5642743 Glycine max
Glyma.15G073700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5640744-5642743 Glycine max
Glyma.15G073700 2.0kb downstream 2.0kb downstream 4343 true Chr15: 5636401-5640743 Glycine max
Glyma.15G073700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5636401-5638400 Glycine max
Glyma.15G073700 5.0kb upstream 5.0kb upstream 7343 true Chr15: 5638401-5645743 Glycine max
Glyma.15G073700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5640744-5645743 Glycine max
Glyma.15G073700 5.0kb downstream 5.0kb downstream 7343 true Chr15: 5633401-5640743 Glycine max
Glyma.15G073700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5633401-5638400 Glycine max
Glyma.15G073700 10.0kb upstream 10.0kb upstream 12343 true Chr15: 5638401-5650743 Glycine max
Glyma.15G073700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5640744-5650743 Glycine max
Glyma.15G073700 10.0kb downstream 10.0kb downstream 12343 true Chr15: 5628401-5640743 Glycine max
Glyma.15G073700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5628401-5638400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309912 5265 Fabidae View MSA
124070721 5270 Rosid View MSA
123750753 5271 Pentapetalae View MSA
122796389 5272 Eudicot View MSA
122051949 5273 Angiosperm View MSA
121312825 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0806 0.0 67.9694   High
cufflinks 8.38362 0.0 39.4742    
cufflinks 11.3157 0.0 50.6669    
cufflinks 7.16332 0.0 31.3219    
cufflinks 10.0806 0.0 44.098    
cufflinks 10.4755 0.0 39.1338    
cufflinks 3.16012 0.0 18.282   Low
cufflinks 5.33746 0.0 25.6177    
cufflinks 5.78874 0.0 27.8329    
cufflinks 0.539       Low
cufflinks 1.168        
cufflinks 3.217        
cufflinks 1.073        
cufflinks 0.688       Low
cufflinks 9.959     High High
cufflinks 9.943     High High
cufflinks 0.849        
cufflinks 3.701        
cufflinks 1.956        
cufflinks 14.926     High High
cufflinks 0.924        
cufflinks 10.56     High High
cufflinks 5.044        
cufflinks 1.153        
cufflinks 13.191     High High
cufflinks 1.485        

0 Strain