Protein Family : zinc finger, C3HC4 type domain containing protein, expressed 122051949

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  225

225 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29851.t000050 (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 2409   29851: 290562-292970
29897.t000008 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 R. communis v0.1 798   29897: 211823-212620
29983.t000100 (1 of 1) PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 3396   29983: 585959-589354
Cucsa.046190 (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. sativus v1.0 3030   scaffold00542: 1769880-1772909
Cucsa.123210 (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. sativus v1.0 2525   scaffold01000: 488908-491432
Cucsa.147700 (1 of 2) PTHR12313//PTHR12313:SF5 - RNF5 C. sativus v1.0 2394   scaffold01107: 109628-112021
orange1.1g026346m.g (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. sinensis v1.1 3285   scaffold00010: 2126356-2129640
orange1.1g024938m.g (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. sinensis v1.1 2889   scaffold00012: 84854-87742
AT4G03510 (1 of 6) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) A. thaliana TAIR10 RMA1 2309   Chr4: 1557120-1559428
AT4G28270 (1 of 6) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) A. thaliana TAIR10 RMA2 1481   Chr4: 14007539-14009019
AT4G27470 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 A. thaliana TAIR10 RMA3 1520   Chr4: 13734999-13736518
Thhalv10026108m.g (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 E. salsugineum v1.0 1820   scaffold_1: 5394989-5396808
Thhalv10026313m.g (1 of 4) PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED E. salsugineum v1.0 1601   scaffold_1: 5105458-5107058
Thhalv10014518m.g (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 E. salsugineum v1.0 1786   scaffold_2: 11514038-11515823
Thhalv10028914m.g (1 of 4) PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED E. salsugineum v1.0 1855   scaffold_3: 1778214-1780068
Ciclev10009229m.g (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. clementina v1.0 2927   scaffold_1: 17879966-17882892
Ciclev10016469m.g (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. clementina v1.0 3346   scaffold_2: 33369934-33373279
Lus10018589.g (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 L. usitatissimum v1.0 645   scaffold1308: 463561-464205
Lus10011184.g (1 of 2) PTHR12313//PTHR12313:SF6 - RNF5 L. usitatissimum v1.0 735   scaffold1376: 61947-62681
Lus10039821.g (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 L. usitatissimum v1.0 690   scaffold15: 1779707-1780396
Lus10018489.g (1 of 2) PTHR12313//PTHR12313:SF6 - RNF5 L. usitatissimum v1.0 735   scaffold251: 687008-687742
Lus10033697.g (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 L. usitatissimum v1.0 636   scaffold701: 1162508-1163143
Gorai.002G018100 (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 G. raimondii v2.1 2526   Chr02: 1223765-1226290
Gorai.002G071500 (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 G. raimondii v2.1 1863   Chr02: 8324202-8326064
Gorai.012G129300 (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 G. raimondii v2.1 2160   Chr12: 29761013-29763172
Gorai.009G170000 (1 of 2) PTHR12313//PTHR12313:SF6 - RNF5 G. raimondii v2.1 2630   Chr09: 13106091-13108720
Gorai.005G202000 (1 of 1) PF14634 - zinc-RING finger domain (zf-RING_5) G. raimondii v2.1 2513   Chr05: 57860210-57862722
Gorai.009G390700 (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 G. raimondii v2.1 1226   Chr09: 52980173-52981398
Gorai.011G027500 (1 of 2) PTHR12313//PTHR12313:SF6 - RNF5 G. raimondii v2.1 2687   Chr11: 2018441-2021127
Thecc1EG008094 (1 of 1) PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED T. cacao v1.1 3204   scaffold_2: 11057814-11061017

225 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29851.m002408 R. communis v0.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
29897.m000362 R. communis v0.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
Cucsa.147700.1 C. sativus v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
Thhalv10026108m E. salsugineum v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Ciclev10009229m C. clementina v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 2 5273 Angiosperm
Lus10018489 L. usitatissimum v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 5 5273 Angiosperm
Lus10018589 L. usitatissimum v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 5 5273 Angiosperm
Gorai.002G018100.1 G. raimondii v2.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 7 5273 Angiosperm
Gorai.011G027500.1 G. raimondii v2.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 7 5273 Angiosperm
Thecc1EG029883t1 T. cacao v1.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
Thecc1EG031438t1 T. cacao v1.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
Araha.9087s0006.1.p A. halleri v1.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm
Migut.M01146.1.p M. guttatus v2.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Migut.H01931.1.p M. guttatus v2.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Glyma.12G151200.1.p G. max Wm82.a2.v1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 8 5273 Angiosperm
Brara.A01799.1.p B. rapa FPsc v1.3 122051949 zinc finger, C3HC4 type domain containing protein, expressed 6 5273 Angiosperm
Brara.I00230.1.p B. rapa FPsc v1.3 122051949 zinc finger, C3HC4 type domain containing protein, expressed 6 5273 Angiosperm
Bostr.7867s0663.1.p B. stricta v1.2 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Bostr.2983s0090.1.p B. stricta v1.2 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Medtr2g013550.2 M. truncatula Mt4.0v1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Medtr4g088875.1 M. truncatula Mt4.0v1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
SapurV1A.0679s0130.1.p S. purpurea v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 9 5273 Angiosperm
SapurV1A.0032s0110.1.p S. purpurea v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 9 5273 Angiosperm
SapurV1A.0685s0170.1.p S. purpurea v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 9 5273 Angiosperm
SapurV1A.0012s0240.1.p S. purpurea v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 9 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00009.372 A. trichopoda v1.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 1 5273 Angiosperm
Traes_2BL_03D157FCD.1 T. aestivum v2.2 122051949 zinc finger, C3HC4 type domain containing protein, expressed 2 5273 Angiosperm
Traes_2AL_12C2EA5501.3 T. aestivum v2.2 122051949 zinc finger, C3HC4 type domain containing protein, expressed 2 5273 Angiosperm
Eucgr.D00626.1.p E. grandis v2.0 122051949 zinc finger, C3HC4 type domain containing protein, expressed 4 5273 Angiosperm
Prupe.4G046100.1.p P. persica v2.1 122051949 zinc finger, C3HC4 type domain containing protein, expressed 3 5273 Angiosperm