Gene : RMA1 A. thaliana TAIR10
Primary Identifier:  ? AT4G03510 Defline:  (1 of 6) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5)
Genomic Order:  408 Name:  ? AT4G03510
Secondary Identifier:  ? PAC:19646694
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G03510 0.5kb upstream 0.5kb upstream 2809 true Chr4: 1557120-1559928 Arabidopsis thaliana
AT4G03510 0.5kb upstream 0.5kb upstream 500 false Chr4: 1559429-1559928 Arabidopsis thaliana
AT4G03510 0.5kb downstream 0.5kb downstream 2809 true Chr4: 1556620-1559428 Arabidopsis thaliana
AT4G03510 0.5kb downstream 0.5kb downstream 500 false Chr4: 1556620-1557119 Arabidopsis thaliana
AT4G03510 1.0kb upstream 1.0kb upstream 3309 true Chr4: 1557120-1560428 Arabidopsis thaliana
AT4G03510 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1559429-1560428 Arabidopsis thaliana
AT4G03510 1.0kb downstream 1.0kb downstream 3309 true Chr4: 1556120-1559428 Arabidopsis thaliana
AT4G03510 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1556120-1557119 Arabidopsis thaliana
AT4G03510 2.0kb upstream 2.0kb upstream 4309 true Chr4: 1557120-1561428 Arabidopsis thaliana
AT4G03510 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1559429-1561428 Arabidopsis thaliana
AT4G03510 2.0kb downstream 2.0kb downstream 4309 true Chr4: 1555120-1559428 Arabidopsis thaliana
AT4G03510 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1555120-1557119 Arabidopsis thaliana
AT4G03510 5.0kb upstream 5.0kb upstream 7309 true Chr4: 1557120-1564428 Arabidopsis thaliana
AT4G03510 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1559429-1564428 Arabidopsis thaliana
AT4G03510 5.0kb downstream 5.0kb downstream 7309 true Chr4: 1552120-1559428 Arabidopsis thaliana
AT4G03510 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1552120-1557119 Arabidopsis thaliana
AT4G03510 10.0kb upstream 10.0kb upstream 12309 true Chr4: 1557120-1569428 Arabidopsis thaliana
AT4G03510 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1559429-1569428 Arabidopsis thaliana
AT4G03510 10.0kb downstream 10.0kb downstream 12309 true Chr4: 1547120-1559428 Arabidopsis thaliana
AT4G03510 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1547120-1557119 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361245 5261 Brassicaceae View MSA
123829632 5264 Brassicales-Malvales View MSA
124321613 5266 SBM View MSA
124252908 5268 Malvidae View MSA
124070721 5270 Rosid View MSA
123750753 5271 Pentapetalae View MSA
122796389 5272 Eudicot View MSA
122051949 5273 Angiosperm View MSA
121312825 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.429        
cufflinks 2.051        
cufflinks 6.737        
cufflinks 3.66        
cufflinks 9.805       High
cufflinks 2.044        

0 Strain