Gene : Glyma.15G123000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF9 - MYB FAMILY TRANSCRIPTION FACTOR Genomic Order:  1230
Name:  ? Glyma.15G123000 Secondary Identifier:  ? PAC:30498415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G123000 0.5kb upstream 0.5kb upstream 3959 true Chr15: 9776235-9780193 Glycine max
Glyma.15G123000 0.5kb upstream 0.5kb upstream 500 false Chr15: 9776235-9776734 Glycine max
Glyma.15G123000 0.5kb downstream 0.5kb downstream 3959 true Chr15: 9776735-9780693 Glycine max
Glyma.15G123000 0.5kb downstream 0.5kb downstream 500 false Chr15: 9780194-9780693 Glycine max
Glyma.15G123000 1.0kb upstream 1.0kb upstream 4459 true Chr15: 9775735-9780193 Glycine max
Glyma.15G123000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9775735-9776734 Glycine max
Glyma.15G123000 1.0kb downstream 1.0kb downstream 4459 true Chr15: 9776735-9781193 Glycine max
Glyma.15G123000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9780194-9781193 Glycine max
Glyma.15G123000 2.0kb upstream 2.0kb upstream 5459 true Chr15: 9774735-9780193 Glycine max
Glyma.15G123000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9774735-9776734 Glycine max
Glyma.15G123000 2.0kb downstream 2.0kb downstream 5459 true Chr15: 9776735-9782193 Glycine max
Glyma.15G123000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9780194-9782193 Glycine max
Glyma.15G123000 5.0kb upstream 5.0kb upstream 8459 true Chr15: 9771735-9780193 Glycine max
Glyma.15G123000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9771735-9776734 Glycine max
Glyma.15G123000 5.0kb downstream 5.0kb downstream 8459 true Chr15: 9776735-9785193 Glycine max
Glyma.15G123000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9780194-9785193 Glycine max
Glyma.15G123000 10.0kb upstream 10.0kb upstream 13459 true Chr15: 9766735-9780193 Glycine max
Glyma.15G123000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9766735-9776734 Glycine max
Glyma.15G123000 10.0kb downstream 10.0kb downstream 13459 true Chr15: 9776735-9790193 Glycine max
Glyma.15G123000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9780194-9790193 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305125 5265 Fabidae View MSA
124064391 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6751 0.0 79.6363    
cufflinks 32.8259 0.0 129.117 High  
cufflinks 9.65204 0.0 37.8391   Low
cufflinks 22.0135 0.0 82.7737 High  
cufflinks 24.3067 0.0 92.508 High  
cufflinks 44.6844 0.0 166.984 High High
cufflinks 31.8295 0.0 124.667 High  
cufflinks 28.2516 0.0 108.588 High  
cufflinks 25.6124 0.0 97.4182 High  
cufflinks 4.052        
cufflinks 3.742        
cufflinks 2.822       Low
cufflinks 4.472        
cufflinks 4.418        
cufflinks 4.77        
cufflinks 4.296        
cufflinks 2.898       Low
cufflinks 3.061       Low
cufflinks 5.316       High
cufflinks 3.936        
cufflinks 5.331       High
cufflinks 3.889        
cufflinks 3.376        
cufflinks 2.449       Low
cufflinks 3.978        
cufflinks 4.05        

0 Strain