Gene : Glyma.15G123100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31314:SF5 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  1231
Name:  ? Glyma.15G123100 Secondary Identifier:  ? PAC:30498363
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G123100 0.5kb upstream 0.5kb upstream 8462 true Chr15: 9781977-9790438 Glycine max
Glyma.15G123100 0.5kb upstream 0.5kb upstream 500 false Chr15: 9781977-9782476 Glycine max
Glyma.15G123100 0.5kb downstream 0.5kb downstream 8462 true Chr15: 9782477-9790938 Glycine max
Glyma.15G123100 0.5kb downstream 0.5kb downstream 500 false Chr15: 9790439-9790938 Glycine max
Glyma.15G123100 1.0kb upstream 1.0kb upstream 8962 true Chr15: 9781477-9790438 Glycine max
Glyma.15G123100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9781477-9782476 Glycine max
Glyma.15G123100 1.0kb downstream 1.0kb downstream 8962 true Chr15: 9782477-9791438 Glycine max
Glyma.15G123100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9790439-9791438 Glycine max
Glyma.15G123100 2.0kb upstream 2.0kb upstream 9962 true Chr15: 9780477-9790438 Glycine max
Glyma.15G123100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9780477-9782476 Glycine max
Glyma.15G123100 2.0kb downstream 2.0kb downstream 9962 true Chr15: 9782477-9792438 Glycine max
Glyma.15G123100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9790439-9792438 Glycine max
Glyma.15G123100 5.0kb upstream 5.0kb upstream 12962 true Chr15: 9777477-9790438 Glycine max
Glyma.15G123100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9777477-9782476 Glycine max
Glyma.15G123100 5.0kb downstream 5.0kb downstream 12962 true Chr15: 9782477-9795438 Glycine max
Glyma.15G123100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9790439-9795438 Glycine max
Glyma.15G123100 10.0kb upstream 10.0kb upstream 17962 true Chr15: 9772477-9790438 Glycine max
Glyma.15G123100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9772477-9782476 Glycine max
Glyma.15G123100 10.0kb downstream 10.0kb downstream 17962 true Chr15: 9782477-9800438 Glycine max
Glyma.15G123100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9790439-9800438 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303013 5265 Fabidae View MSA
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.959 0.0 127.137 High  
cufflinks 29.6039 0.0 121.427 High  
cufflinks 25.9878 0.0 95.9306 High  
cufflinks 23.1766 0.0 100.408 High  
cufflinks 19.4639 0.0 71.379   Low
cufflinks 40.4951 0.0 184.627 High High
cufflinks 18.6644 0.0 75.1204   Low
cufflinks 30.0241 0.0 111.071 High  
cufflinks 24.0696 0.0 87.9229 High  
cufflinks 1.267        
cufflinks 0.491       Low
cufflinks 1.174        
cufflinks 1.221        
cufflinks 1.079        
cufflinks 0.272       Low
cufflinks 1.178        
cufflinks 1.075        
cufflinks 1.07        
cufflinks 1.327        
cufflinks 1.273        
cufflinks 0.423       Low
cufflinks 1.267        
cufflinks 1.279        
cufflinks 0.619        
cufflinks 1.207        
cufflinks 0.713        

0 Strain