Gene : Glyma.15G111200 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  1112
Name:  ? Glyma.15G111200 Secondary Identifier:  ? PAC:30498029
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G111200 0.5kb upstream 0.5kb upstream 5203 true Chr15: 8705907-8711109 Glycine max
Glyma.15G111200 0.5kb upstream 0.5kb upstream 500 false Chr15: 8710610-8711109 Glycine max
Glyma.15G111200 0.5kb downstream 0.5kb downstream 5203 true Chr15: 8705407-8710609 Glycine max
Glyma.15G111200 0.5kb downstream 0.5kb downstream 500 false Chr15: 8705407-8705906 Glycine max
Glyma.15G111200 1.0kb upstream 1.0kb upstream 5703 true Chr15: 8705907-8711609 Glycine max
Glyma.15G111200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8710610-8711609 Glycine max
Glyma.15G111200 1.0kb downstream 1.0kb downstream 5703 true Chr15: 8704907-8710609 Glycine max
Glyma.15G111200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8704907-8705906 Glycine max
Glyma.15G111200 2.0kb upstream 2.0kb upstream 6703 true Chr15: 8705907-8712609 Glycine max
Glyma.15G111200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8710610-8712609 Glycine max
Glyma.15G111200 2.0kb downstream 2.0kb downstream 6703 true Chr15: 8703907-8710609 Glycine max
Glyma.15G111200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8703907-8705906 Glycine max
Glyma.15G111200 5.0kb upstream 5.0kb upstream 9703 true Chr15: 8705907-8715609 Glycine max
Glyma.15G111200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8710610-8715609 Glycine max
Glyma.15G111200 5.0kb downstream 5.0kb downstream 9703 true Chr15: 8700907-8710609 Glycine max
Glyma.15G111200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8700907-8705906 Glycine max
Glyma.15G111200 10.0kb upstream 10.0kb upstream 14703 true Chr15: 8705907-8720609 Glycine max
Glyma.15G111200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8710610-8720609 Glycine max
Glyma.15G111200 10.0kb downstream 10.0kb downstream 14703 true Chr15: 8695907-8710609 Glycine max
Glyma.15G111200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8695907-8705906 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253779 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00751649 0.0 0.0339934 Low Low
cufflinks 0.0215605 0.0 0.0894071 Low  
cufflinks 0.0403692 0.0 0.161931 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0193052 0.0 0.0807893 Low  
cufflinks 0.0139426 0.0 0.0597513 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.130347 0.0 0.500345 Low High
cufflinks 0.081545 0.0 0.319364 Low High
cufflinks 0.034     Low  
cufflinks 0.016     Low  
cufflinks 0.038     Low High
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.004     Low Low
cufflinks 0.024     Low  
cufflinks 0.003     Low Low
cufflinks 0.146       High
cufflinks 0.012     Low  
cufflinks 0.007     Low  
cufflinks 0.009     Low  
cufflinks 0.033     Low  
cufflinks 0.008     Low  
cufflinks 0.012     Low  
cufflinks 0.017     Low  
cufflinks 0.007     Low  

0 Strain